Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AP003499.2-201ENST00000624100 483 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 U3.53-201ENST00000628922 216 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.55□□□□□ -1.68
XRCC1P18887 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.55□□□□□ -1.68
XRCC1P18887 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
XRCC1P18887 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
XRCC1P18887 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
XRCC1P18887 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
XRCC1P18887 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
XRCC1P18887 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.55□□□□□ -1.68
XRCC1P18887 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
XRCC1P18887 AL132640.2-201ENST00000559968 1698 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
XRCC1P18887 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.54□□□□□ -1.68
XRCC1P18887 AC110792.3-201ENST00000595906 1614 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
XRCC1P18887 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.54□□□□□ -1.68
XRCC1P18887 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
XRCC1P18887 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
XRCC1P18887 AC083799.1-201ENST00000366451 910 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
XRCC1P18887 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
XRCC1P18887 VDAC1P9-201ENST00000412766 841 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 MTCYBP7-201ENST00000419540 1134 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.54□□□□□ -1.68
XRCC1P18887 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.54□□□□□ -1.68
XRCC1P18887 AL356806.1-201ENST00000422524 916 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 YY1P1-201ENST00000427625 668 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.54□□□□□ -1.68
XRCC1P18887 RPL23AP1-201ENST00000428990 471 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.54□□□□□ -1.68
XRCC1P18887 VN1R48P-201ENST00000448149 1036 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 snoU13.1-201ENST00000459157 104 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 EIF2S2P4-201ENST00000461070 984 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 RN7SL41P-201ENST00000476144 297 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 LARP7P4-201ENST00000481075 878 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 CEACAMP10-202ENST00000495431 496 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 OR51K1P-201ENST00000510214 950 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 AC092593.2-201ENST00000513866 913 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 RNA5SP360-201ENST00000516555 118 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
XRCC1P18887 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.54□□□□□ -1.68
XRCC1P18887 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.54□□□□□ -1.68
XRCC1P18887 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
XRCC1P18887 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.54□□□□□ -1.68
XRCC1P18887 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.54□□□□□ -1.68
XRCC1P18887 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.54□□□□□ -1.68
XRCC1P18887 AC020658.4-201ENST00000613987 684 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.54□□□□□ -1.68
XRCC1P18887 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.54□□□□□ -1.68
XRCC1P18887 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
XRCC1P18887 KARSP3-201ENST00000571212 1504 ntBASIC4.54□□□□□ -1.68
XRCC1P18887 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
XRCC1P18887 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
XRCC1P18887 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
XRCC1P18887 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
XRCC1P18887 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
XRCC1P18887 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
XRCC1P18887 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.54□□□□□ -1.68
XRCC1P18887 AC107027.3-201ENST00000565095 3473 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.53□□□□□ -1.68
XRCC1P18887 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
XRCC1P18887 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.53□□□□□ -1.68
XRCC1P18887 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
XRCC1P18887 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
XRCC1P18887 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
XRCC1P18887 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
XRCC1P18887 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
XRCC1P18887 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
XRCC1P18887 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
XRCC1P18887 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.53□□□□□ -1.68
XRCC1P18887 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
XRCC1P18887 OR56B2P-201ENST00000317102 954 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
XRCC1P18887 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
XRCC1P18887 SNORA71.2-201ENST00000364941 134 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 SDHCP2-201ENST00000398565 501 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 RPL5P19-201ENST00000404228 893 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 RN7SKP167-201ENST00000411047 285 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 AC006065.1-201ENST00000422539 802 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 RPS27AP7-201ENST00000422792 455 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 CNOT7P1-201ENST00000429006 852 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.53□□□□□ -1.68
XRCC1P18887 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.53□□□□□ -1.68
XRCC1P18887 AC069277.2-201ENST00000454211 432 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.53□□□□□ -1.68
XRCC1P18887 AC104763.1-201ENST00000475274 360 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 RN7SL481P-201ENST00000477764 299 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 MTND4LP2-201ENST00000502312 285 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 AC007016.1-201ENST00000512110 244 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 IGLV3-26-201ENST00000520756 302 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.53□□□□□ -1.68
XRCC1P18887 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.53□□□□□ -1.68
XRCC1P18887 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.53□□□□□ -1.68
XRCC1P18887 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.53□□□□□ -1.68
XRCC1P18887 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.53□□□□□ -1.68
XRCC1P18887 AP005119.2-201ENST00000579735 1105 ntBASIC4.53□□□□□ -1.68
XRCC1P18887 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms