Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.46□□□□□ -1.69
HLA-DOBP13765 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.69
HLA-DOBP13765 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DOBP13765 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.46□□□□□ -1.69
HLA-DOBP13765 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.46□□□□□ -1.69
HLA-DOBP13765 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.46□□□□□ -1.69
HLA-DOBP13765 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DOBP13765 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 RNU4-68P-201ENST00000364314 141 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 MIR513B-201ENST00000385136 84 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 Y_RNA.578-201ENST00000390903 88 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC107081.1-201ENST00000414975 361 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 BX510359.3-201ENST00000422168 306 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DOBP13765 RPL35AP21-201ENST00000437667 333 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC073052.1-201ENST00000440417 714 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 AL353093.1-201ENST00000441292 436 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 AL163193.1-201ENST00000444895 788 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 AL356981.1-201ENST00000454879 684 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 NAP1L1P3-201ENST00000462291 880 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 RN7SL629P-201ENST00000489622 285 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC023424.1-201ENST00000496058 459 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC119751.5-201ENST00000514077 770 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC022832.1-201ENST00000530718 645 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC006518.2-201ENST00000542513 940 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 MRPS36P5-201ENST00000551909 298 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 MIR4691-201ENST00000583764 85 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 SS18L2P2-201ENST00000583960 235 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 GAS5-AS1-201ENST00000602767 694 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC008536.1-201ENST00000602872 669 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 AL139407.1-201ENST00000613826 1175 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC021755.4-201ENST00000616620 456 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 AL356274.1-201ENST00000617064 410 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 AP002791.1-201ENST00000623291 381 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DOBP13765 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DOBP13765 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 NEAT1-202ENST00000501122 22743 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
HLA-DOBP13765 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DOBP13765 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DOBP13765 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DOBP13765 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DOBP13765 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DOBP13765 THAP12P4-201ENST00000528321 2266 ntBASIC4.46□□□□□ -1.7
HLA-DOBP13765 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DOBP13765 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DOBP13765 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DOBP13765 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DOBP13765 AC010266.2-201ENST00000564741 3255 ntBASIC4.45□□□□□ -1.7
HLA-DOBP13765 AP001284.1-201ENST00000528393 2118 ntBASIC4.45□□□□□ -1.7
HLA-DOBP13765 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DOBP13765 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.45□□□□□ -1.7
HLA-DOBP13765 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DOBP13765 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DOBP13765 SEC63P2-201ENST00000503863 1939 ntBASIC4.45□□□□□ -1.7
HLA-DOBP13765 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DOBP13765 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DOBP13765 RNU4-51P-201ENST00000364206 140 ntBASIC4.45□□□□□ -1.7
HLA-DOBP13765 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DOBP13765 MIR137-201ENST00000385223 102 ntBASIC4.45□□□□□ -1.7
HLA-DOBP13765 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HLA-DOBP13765 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.45□□□□□ -1.7
HLA-DOBP13765 MTCO2P31-201ENST00000402702 684 ntBASIC4.45□□□□□ -1.7
HLA-DOBP13765 MIR1178-201ENST00000408396 91 ntBASIC4.45□□□□□ -1.7
HLA-DOBP13765 RNU4-22P-201ENST00000411058 166 ntBASIC4.45□□□□□ -1.7
HLA-DOBP13765 AC007738.1-201ENST00000413892 348 ntBASIC4.45□□□□□ -1.7
HLA-DOBP13765 RPS7P9-201ENST00000414704 586 ntBASIC4.45□□□□□ -1.7
HLA-DOBP13765 RPS24P7-201ENST00000416921 246 ntBASIC4.45□□□□□ -1.7
HLA-DOBP13765 OR2X1P-201ENST00000421144 687 ntBASIC4.45□□□□□ -1.7
HLA-DOBP13765 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms