Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.28□□□□□ -1.4
ITGA4P13612 AP001596.2-201ENST00000608410 312 ntBASIC6.28□□□□□ -1.4
ITGA4P13612 Z99129.1-201ENST00000612510 255 ntBASIC6.28□□□□□ -1.4
ITGA4P13612 AC025594.3-201ENST00000613068 790 ntBASIC6.28□□□□□ -1.4
ITGA4P13612 AC008115.3-201ENST00000614874 549 ntBASIC6.28□□□□□ -1.4
ITGA4P13612 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.28□□□□□ -1.4
ITGA4P13612 MIR6826-201ENST00000617808 98 ntBASIC6.28□□□□□ -1.4
ITGA4P13612 AC005840.5-201ENST00000619166 599 ntBASIC6.28□□□□□ -1.4
ITGA4P13612 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ITGA4P13612 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
ITGA4P13612 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.28□□□□□ -1.4
ITGA4P13612 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ITGA4P13612 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ITGA4P13612 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ITGA4P13612 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
ITGA4P13612 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
ITGA4P13612 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
ITGA4P13612 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
ITGA4P13612 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ITGA4P13612 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
ITGA4P13612 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.4
ITGA4P13612 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
ITGA4P13612 RARSP1-201ENST00000542842 1418 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 DNM1P47-203ENST00000571780 12667 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 AL121657.1-201ENST00000327215 531 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 AL159987.1-201ENST00000347911 293 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC6.27□□□□□ -1.41
ITGA4P13612 OR6E1P-201ENST00000414424 923 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 CYCSP46-201ENST00000423569 204 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.27□□□□□ -1.41
ITGA4P13612 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.27□□□□□ -1.41
ITGA4P13612 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.27□□□□□ -1.41
ITGA4P13612 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.27□□□□□ -1.41
ITGA4P13612 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC6.27□□□□□ -1.41
ITGA4P13612 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.27□□□□□ -1.41
ITGA4P13612 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
ITGA4P13612 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.27□□□□□ -1.41
ITGA4P13612 RPL9P33-201ENST00000484311 566 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 EIF3LP3-201ENST00000495197 822 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.27□□□□□ -1.41
ITGA4P13612 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.27□□□□□ -1.41
ITGA4P13612 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.27□□□□□ -1.41
ITGA4P13612 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.27□□□□□ -1.41
ITGA4P13612 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.27□□□□□ -1.41
ITGA4P13612 AC136777.2-201ENST00000522979 358 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.27□□□□□ -1.41
ITGA4P13612 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.27□□□□□ -1.41
ITGA4P13612 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.27□□□□□ -1.41
ITGA4P13612 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC6.27□□□□□ -1.41
ITGA4P13612 AC090186.1-201ENST00000605991 572 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 AL513477.2-201ENST00000607858 568 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 AL121873.1-201ENST00000616013 524 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 AL355974.3-201ENST00000617383 467 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
ITGA4P13612 CU639417.4-201ENST00000623928 207 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 AL603839.4-201ENST00000624658 1005 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.27□□□□□ -1.41
ITGA4P13612 AC099063.3-201ENST00000642066 185 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
ITGA4P13612 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
ITGA4P13612 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
ITGA4P13612 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.27□□□□□ -1.41
ITGA4P13612 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.27□□□□□ -1.41
ITGA4P13612 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
ITGA4P13612 AC004076.2-201ENST00000620532 3323 ntBASIC6.27□□□□□ -1.41
ITGA4P13612 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ITGA4P13612 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
ITGA4P13612 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
ITGA4P13612 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.26□□□□□ -1.41
ITGA4P13612 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
ITGA4P13612 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ITGA4P13612 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.26□□□□□ -1.41
ITGA4P13612 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ITGA4P13612 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ITGA4P13612 RNA5SP514-201ENST00000363717 111 ntBASIC6.26□□□□□ -1.41
ITGA4P13612 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
ITGA4P13612 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.26□□□□□ -1.41
ITGA4P13612 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms