Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRT3P12035 KARSP3-201ENST00000571212 1504 ntBASIC4.82□□□□□ -1.64
KRT3P12035 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRT3P12035 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRT3P12035 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRT3P12035 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRT3P12035 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.82□□□□□ -1.64
KRT3P12035 AC092435.4-201ENST00000623012 4159 ntBASIC4.82□□□□□ -1.64
KRT3P12035 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRT3P12035 AC005332.5-201ENST00000591222 2919 ntBASIC4.82□□□□□ -1.64
KRT3P12035 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRT3P12035 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRT3P12035 RNU6-40P-201ENST00000384254 107 ntBASIC4.82□□□□□ -1.64
KRT3P12035 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.82□□□□□ -1.64
KRT3P12035 AC073136.2-201ENST00000417282 849 ntBASIC4.82□□□□□ -1.64
KRT3P12035 BTF3P9-201ENST00000418784 283 ntBASIC4.82□□□□□ -1.64
KRT3P12035 AL360081.1-201ENST00000428299 555 ntBASIC4.82□□□□□ -1.64
KRT3P12035 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT3P12035 MTCYBP29-201ENST00000436327 1006 ntBASIC4.82□□□□□ -1.64
KRT3P12035 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRT3P12035 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT3P12035 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT3P12035 AC006967.1-201ENST00000467608 589 ntBASIC4.82□□□□□ -1.64
KRT3P12035 CCDC75P1-201ENST00000469247 791 ntBASIC4.82□□□□□ -1.64
KRT3P12035 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.82□□□□□ -1.64
KRT3P12035 MTND4LP2-201ENST00000502312 285 ntBASIC4.82□□□□□ -1.64
KRT3P12035 HMGB1P3-201ENST00000502802 616 ntBASIC4.82□□□□□ -1.64
KRT3P12035 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.82□□□□□ -1.64
KRT3P12035 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT3P12035 AC113430.1-201ENST00000506872 718 ntBASIC4.82□□□□□ -1.64
KRT3P12035 RNA5SP446-201ENST00000515955 82 ntBASIC4.82□□□□□ -1.64
KRT3P12035 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT3P12035 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.82□□□□□ -1.64
KRT3P12035 OR5M2P-201ENST00000529003 936 ntBASIC4.82□□□□□ -1.64
KRT3P12035 AC091178.1-203ENST00000584586 279 ntBASIC4.82□□□□□ -1.64
KRT3P12035 ADAD1P2-201ENST00000588476 646 ntBASIC4.82□□□□□ -1.64
KRT3P12035 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT3P12035 AL355802.4-201ENST00000607635 548 ntBASIC4.82□□□□□ -1.64
KRT3P12035 AL049539.1-201ENST00000611964 459 ntBASIC4.82□□□□□ -1.64
KRT3P12035 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT3P12035 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT3P12035 AC004232.3-201ENST00000622977 525 ntBASIC4.82□□□□□ -1.64
KRT3P12035 AC005086.4-201ENST00000623065 213 ntBASIC4.82□□□□□ -1.64
KRT3P12035 AL356490.1-201ENST00000623079 479 ntBASIC4.82□□□□□ -1.64
KRT3P12035 AC091953.3-201ENST00000623220 236 ntBASIC4.82□□□□□ -1.64
KRT3P12035 AC020923.1-201ENST00000624021 917 ntBASIC4.82□□□□□ -1.64
KRT3P12035 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
KRT3P12035 CASC19-204ENST00000641001 2055 ntBASIC4.82□□□□□ -1.64
KRT3P12035 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT3P12035 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRT3P12035 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRT3P12035 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT3P12035 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT3P12035 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT3P12035 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
KRT3P12035 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT3P12035 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT3P12035 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT3P12035 VDAC1P9-201ENST00000412766 841 ntBASIC4.81□□□□□ -1.64
KRT3P12035 RPS26P47-201ENST00000427219 348 ntBASIC4.81□□□□□ -1.64
KRT3P12035 RPL23AP4-201ENST00000427757 463 ntBASIC4.81□□□□□ -1.64
KRT3P12035 RPL21P91-201ENST00000429231 479 ntBASIC4.81□□□□□ -1.64
KRT3P12035 RPL36AP15-201ENST00000444514 266 ntBASIC4.81□□□□□ -1.64
KRT3P12035 APOOP2-201ENST00000461561 539 ntBASIC4.81□□□□□ -1.64
KRT3P12035 AC021205.1-201ENST00000468797 348 ntBASIC4.81□□□□□ -1.64
KRT3P12035 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
KRT3P12035 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT3P12035 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT3P12035 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT3P12035 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.81□□□□□ -1.64
KRT3P12035 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT3P12035 MTND2P7-201ENST00000521337 640 ntBASIC4.81□□□□□ -1.64
KRT3P12035 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT3P12035 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRT3P12035 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRT3P12035 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT3P12035 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.81□□□□□ -1.64
KRT3P12035 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT3P12035 MIR4480-201ENST00000582492 71 ntBASIC4.81□□□□□ -1.64
KRT3P12035 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT3P12035 AC133552.5-201ENST00000604266 540 ntBASIC4.81□□□□□ -1.64
KRT3P12035 AC131238.1-201ENST00000617135 328 ntBASIC4.81□□□□□ -1.64
KRT3P12035 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT3P12035 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
KRT3P12035 AC093535.2-201ENST00000624769 2326 ntBASIC4.81□□□□□ -1.64
KRT3P12035 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT3P12035 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT3P12035 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
KRT3P12035 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.81□□□□□ -1.64
KRT3P12035 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT3P12035 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT3P12035 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRT3P12035 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT3P12035 AL592182.3-201ENST00000642132 3304 ntBASIC4.8□□□□□ -1.64
KRT3P12035 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRT3P12035 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRT3P12035 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRT3P12035 EOGT-210ENST00000615922 1931 ntBASIC4.8□□□□□ -1.64
KRT3P12035 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
KRT3P12035 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms