Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 MIR1269B-201ENST00000580405 75 ntBASIC4.74□□□□□ -1.65
LINGO3P0C6S8 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.74□□□□□ -1.65
LINGO3P0C6S8 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LINGO3P0C6S8 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
LINGO3P0C6S8 DNAJC19P3-201ENST00000594491 331 ntBASIC4.74□□□□□ -1.65
LINGO3P0C6S8 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.74□□□□□ -1.65
LINGO3P0C6S8 AC095055.1-201ENST00000603472 1113 ntBASIC4.74□□□□□ -1.65
LINGO3P0C6S8 AP005229.2-201ENST00000609980 697 ntBASIC4.74□□□□□ -1.65
LINGO3P0C6S8 AC126915.2-201ENST00000610957 190 ntBASIC4.74□□□□□ -1.65
LINGO3P0C6S8 MIR7973-1-201ENST00000614683 76 ntBASIC4.74□□□□□ -1.65
LINGO3P0C6S8 AC026368.1-201ENST00000614934 690 ntBASIC4.74□□□□□ -1.65
LINGO3P0C6S8 AC139769.3-201ENST00000618383 175 ntBASIC4.74□□□□□ -1.65
LINGO3P0C6S8 RMST_9.1-201ENST00000619945 193 ntBASIC4.74□□□□□ -1.65
LINGO3P0C6S8 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.74□□□□□ -1.65
LINGO3P0C6S8 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.74□□□□□ -1.65
LINGO3P0C6S8 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.74□□□□□ -1.65
LINGO3P0C6S8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LINGO3P0C6S8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LINGO3P0C6S8 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LINGO3P0C6S8 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LINGO3P0C6S8 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LINGO3P0C6S8 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LINGO3P0C6S8 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LINGO3P0C6S8 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LINGO3P0C6S8 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.74□□□□□ -1.65
LINGO3P0C6S8 MFSD8-213ENST00000641134 1327 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 MTCO1P18-201ENST00000455518 1419 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 OR4K17-201ENST00000315543 1032 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 RNU1-43P-201ENST00000365052 165 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 RNU6-317P-201ENST00000384031 107 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 MIR708-201ENST00000390708 88 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 NCSTNP1-201ENST00000406229 144 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 DUTP5-201ENST00000406790 469 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 MIR1182-201ENST00000408363 97 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 GSTM3P2-201ENST00000412746 530 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 CEACAMP8-201ENST00000413902 580 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 RPL6P29-201ENST00000414863 865 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 TCEA1P4-201ENST00000415066 844 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 TRGV6-201ENST00000417928 299 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 AL355433.1-201ENST00000422804 300 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 MRPL50P1-201ENST00000431951 384 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 AL031663.1-201ENST00000437445 219 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 CNOT7P2-201ENST00000441051 832 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 AC079841.1-201ENST00000481228 950 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 AC072052.1-201ENST00000496556 306 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 VWA8P1-201ENST00000510889 176 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 RNA5SP392-201ENST00000516905 112 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 AP002812.4-201ENST00000532139 286 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 EIF1P5-201ENST00000585002 234 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 BNIP3P35-201ENST00000604530 490 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 AC016588.2-201ENST00000632484 3021 ntBASIC4.73□□□□□ -1.65
LINGO3P0C6S8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LINGO3P0C6S8 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.72□□□□□ -1.65
LINGO3P0C6S8 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LINGO3P0C6S8 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LINGO3P0C6S8 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LINGO3P0C6S8 IQCB2P-201ENST00000401788 1633 ntBASIC4.72□□□□□ -1.65
LINGO3P0C6S8 EOGT-210ENST00000615922 1931 ntBASIC4.72□□□□□ -1.65
LINGO3P0C6S8 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LINGO3P0C6S8 MAPK10-286ENST00000641208 8747 ntBASIC4.72□□□□□ -1.65
LINGO3P0C6S8 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms