Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.7□□□□□ -1.66
RETP07949 AC023813.4-201ENST00000607580 580 ntBASIC4.7□□□□□ -1.66
RETP07949 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.7□□□□□ -1.66
RETP07949 RNA5SP196-201ENST00000625967 102 ntBASIC4.7□□□□□ -1.66
RETP07949 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.7□□□□□ -1.66
RETP07949 AL133243.3-201ENST00000617415 3004 ntBASIC4.7□□□□□ -1.66
RETP07949 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.7□□□□□ -1.66
RETP07949 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RETP07949 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RETP07949 SALL4P2-201ENST00000423288 2910 ntBASIC4.7□□□□□ -1.66
RETP07949 CYP1D1P-201ENST00000416662 1433 ntBASIC4.7□□□□□ -1.66
RETP07949 OR51C1P-202ENST00000641159 1444 ntBASIC4.7□□□□□ -1.66
RETP07949 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.7□□□□□ -1.66
RETP07949 AL359922.3-201ENST00000624779 1670 ntBASIC4.7□□□□□ -1.66
RETP07949 ZNF137P-201ENST00000456718 1920 ntBASIC4.7□□□□□ -1.66
RETP07949 DDX18P5-201ENST00000534547 1306 ntBASIC4.7□□□□□ -1.66
RETP07949 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RETP07949 AC107068.1-201ENST00000563286 4218 ntBASIC4.7□□□□□ -1.66
RETP07949 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RETP07949 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RETP07949 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.7□□□□□ -1.66
RETP07949 AC008758.3-201ENST00000507003 1829 ntBASIC4.69□□□□□ -1.66
RETP07949 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.69□□□□□ -1.66
RETP07949 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RETP07949 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RETP07949 UGT2B26P-201ENST00000508672 1613 ntBASIC4.69□□□□□ -1.66
RETP07949 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
RETP07949 AC018529.3-201ENST00000624212 2254 ntBASIC4.69□□□□□ -1.66
RETP07949 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RETP07949 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
RETP07949 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.69□□□□□ -1.66
RETP07949 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RETP07949 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
RETP07949 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RETP07949 ATP5F1P3-201ENST00000397213 657 ntBASIC4.69□□□□□ -1.66
RETP07949 SNORA11F-201ENST00000408237 128 ntBASIC4.69□□□□□ -1.66
RETP07949 SNORA11C-201ENST00000408532 129 ntBASIC4.69□□□□□ -1.66
RETP07949 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.69□□□□□ -1.66
RETP07949 RPS29P17-201ENST00000430795 166 ntBASIC4.69□□□□□ -1.66
RETP07949 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.69□□□□□ -1.66
RETP07949 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.69□□□□□ -1.66
RETP07949 SCAND3P1-201ENST00000439854 1060 ntBASIC4.69□□□□□ -1.66
RETP07949 GEMIN8P3-201ENST00000445417 720 ntBASIC4.69□□□□□ -1.66
RETP07949 PHBP16-201ENST00000446318 950 ntBASIC4.69□□□□□ -1.66
RETP07949 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.69□□□□□ -1.66
RETP07949 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.69□□□□□ -1.66
RETP07949 APOOP2-201ENST00000461561 539 ntBASIC4.69□□□□□ -1.66
RETP07949 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RETP07949 OR2A3P-201ENST00000493774 953 ntBASIC4.69□□□□□ -1.66
RETP07949 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.69□□□□□ -1.66
RETP07949 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.69□□□□□ -1.66
RETP07949 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.69□□□□□ -1.66
RETP07949 SNORA67.7-201ENST00000516664 135 ntBASIC4.69□□□□□ -1.66
RETP07949 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.69□□□□□ -1.66
RETP07949 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.69□□□□□ -1.66
RETP07949 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RETP07949 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.69□□□□□ -1.66
RETP07949 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RETP07949 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RETP07949 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.69□□□□□ -1.66
RETP07949 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.69□□□□□ -1.66
RETP07949 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.69□□□□□ -1.66
RETP07949 AL049839.1-201ENST00000556151 657 ntBASIC4.69□□□□□ -1.66
RETP07949 AC053481.3-201ENST00000577881 843 ntBASIC4.69□□□□□ -1.66
RETP07949 AC090948.2-201ENST00000607363 564 ntBASIC4.69□□□□□ -1.66
RETP07949 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.69□□□□□ -1.66
RETP07949 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.69□□□□□ -1.66
RETP07949 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.69□□□□□ -1.66
RETP07949 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.69□□□□□ -1.66
RETP07949 AP000843.1-201ENST00000624880 701 ntBASIC4.69□□□□□ -1.66
RETP07949 AC138627.1-204ENST00000641894 765 ntBASIC4.69□□□□□ -1.66
RETP07949 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.69□□□□□ -1.66
RETP07949 MAPK10-304ENST00000641341 3984 ntBASIC4.69□□□□□ -1.66
RETP07949 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.69□□□□□ -1.66
RETP07949 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.69□□□□□ -1.66
RETP07949 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RETP07949 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RETP07949 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RETP07949 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RETP07949 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RETP07949 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RETP07949 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RETP07949 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RETP07949 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RETP07949 MIR708-201ENST00000390708 88 ntBASIC4.68□□□□□ -1.66
RETP07949 AL592291.1-201ENST00000403830 352 ntBASIC4.68□□□□□ -1.66
RETP07949 RNA5SP44-201ENST00000410446 133 ntBASIC4.68□□□□□ -1.66
RETP07949 CASKP1-201ENST00000412870 582 ntBASIC4.68□□□□□ -1.66
RETP07949 AC011933.1-201ENST00000413334 321 ntBASIC4.68□□□□□ -1.66
RETP07949 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.68□□□□□ -1.66
RETP07949 RPL21P108-201ENST00000413857 481 ntBASIC4.68□□□□□ -1.66
RETP07949 AC244033.1-201ENST00000426826 870 ntBASIC4.68□□□□□ -1.66
RETP07949 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.68□□□□□ -1.66
RETP07949 AC073052.1-201ENST00000440417 714 ntBASIC4.68□□□□□ -1.66
RETP07949 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.68□□□□□ -1.66
RETP07949 MTND4LP12-201ENST00000448237 295 ntBASIC4.68□□□□□ -1.66
RETP07949 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.68□□□□□ -1.66
RETP07949 AL162388.1-201ENST00000450912 352 ntBASIC4.68□□□□□ -1.66
RETP07949 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.68□□□□□ -1.66
RETP07949 AC116533.1-201ENST00000459748 321 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms