Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU6-1320P-201ENST00000390838 107 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 RNU6-1269P-201ENST00000391139 107 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 RNA5SP39-201ENST00000411245 120 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 RBMY2KP-201ENST00000418221 992 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AC007064.3-201ENST00000422608 359 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 USP9YP9-201ENST00000429406 715 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 YWHAEP5-201ENST00000431545 765 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 GSTA7P-201ENST00000438425 448 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 ABCF2P2-201ENST00000450549 296 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 SCARNA10-201ENST00000459255 330 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 RNU6-599P-201ENST00000459383 107 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 RNU6-1193P-201ENST00000459461 107 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 RN7SL354P-201ENST00000469282 294 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 SYT14P1-201ENST00000481459 721 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 RPS6P4-201ENST00000494693 758 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AC004948.1-201ENST00000609858 672 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AC233309.1-201ENST00000619522 751 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 RNU6-368P-201ENST00000620928 107 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AC074140.1-201ENST00000621617 208 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 RNU6-538P-201ENST00000622329 107 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AC019278.1-201ENST00000623516 479 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 U3.53-201ENST00000628922 216 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AC016588.2-201ENST00000632484 3021 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AC015813.6-201ENST00000624409 5808 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 OR10AB1P-202ENST00000641219 1686 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AC007342.9-201ENST00000623877 1385 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 SNORA71.2-201ENST00000364941 134 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 RNU6-891P-201ENST00000384280 111 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 SDHCP2-201ENST00000398565 501 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 SNORA79B-201ENST00000410557 148 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AC002524.1-201ENST00000411687 547 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 RBMY1KP-201ENST00000423480 476 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AC106901.1-201ENST00000425086 698 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AL138787.1-202ENST00000437804 898 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 C1DP3-201ENST00000455013 423 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 RN7SL585P-201ENST00000470538 280 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 MTND3P6-201ENST00000485242 339 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AC231760.1-201ENST00000498002 260 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AL160290.3-201ENST00000604869 165 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AL592494.3-201ENST00000609485 464 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AL161616.1-201ENST00000611867 286 ntBASIC3.94□□□□□ -1.78
HLA-DPB1P04440 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DPB1P04440 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms