Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.98□□□□□ -1.77
APOC1P02654 MIR3934-201ENST00000579806 107 ntBASIC3.98□□□□□ -1.77
APOC1P02654 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.98□□□□□ -1.77
APOC1P02654 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.98□□□□□ -1.77
APOC1P02654 AC020914.4-201ENST00000597690 277 ntBASIC3.98□□□□□ -1.77
APOC1P02654 AL031320.1-201ENST00000604177 357 ntBASIC3.98□□□□□ -1.77
APOC1P02654 AC098935.2-201ENST00000604222 466 ntBASIC3.98□□□□□ -1.77
APOC1P02654 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.98□□□□□ -1.77
APOC1P02654 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
APOC1P02654 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
APOC1P02654 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.98□□□□□ -1.77
APOC1P02654 AC083899.2-201ENST00000423285 1376 ntBASIC3.98□□□□□ -1.77
APOC1P02654 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
APOC1P02654 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.98□□□□□ -1.77
APOC1P02654 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.98□□□□□ -1.77
APOC1P02654 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
APOC1P02654 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
APOC1P02654 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
APOC1P02654 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
APOC1P02654 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.97□□□□□ -1.77
APOC1P02654 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.97□□□□□ -1.77
APOC1P02654 SNORA62.2-201ENST00000364672 152 ntBASIC3.97□□□□□ -1.77
APOC1P02654 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
APOC1P02654 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.97□□□□□ -1.77
APOC1P02654 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
APOC1P02654 MIR513A2-201ENST00000385249 127 ntBASIC3.97□□□□□ -1.77
APOC1P02654 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
APOC1P02654 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
APOC1P02654 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.97□□□□□ -1.77
APOC1P02654 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
APOC1P02654 RAD23BP1-201ENST00000421404 1227 ntBASIC3.97□□□□□ -1.77
APOC1P02654 MTND2P11-201ENST00000423638 648 ntBASIC3.97□□□□□ -1.77
APOC1P02654 AL132765.1-201ENST00000434165 553 ntBASIC3.97□□□□□ -1.77
APOC1P02654 RPL12P46-201ENST00000436610 195 ntBASIC3.97□□□□□ -1.77
APOC1P02654 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.97□□□□□ -1.77
APOC1P02654 HMGB1P16-201ENST00000447155 540 ntBASIC3.97□□□□□ -1.77
APOC1P02654 AC022431.1-201ENST00000450941 438 ntBASIC3.97□□□□□ -1.77
APOC1P02654 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.97□□□□□ -1.77
APOC1P02654 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.97□□□□□ -1.77
APOC1P02654 AC008897.1-201ENST00000494006 347 ntBASIC3.97□□□□□ -1.77
APOC1P02654 AC007016.1-201ENST00000512110 244 ntBASIC3.97□□□□□ -1.77
APOC1P02654 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.97□□□□□ -1.77
APOC1P02654 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.97□□□□□ -1.77
APOC1P02654 UBE2FP2-201ENST00000566646 462 ntBASIC3.97□□□□□ -1.77
APOC1P02654 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.97□□□□□ -1.77
APOC1P02654 AC015911.5-201ENST00000587076 451 ntBASIC3.97□□□□□ -1.77
APOC1P02654 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.97□□□□□ -1.77
APOC1P02654 AL158062.1-201ENST00000619632 745 ntBASIC3.97□□□□□ -1.77
APOC1P02654 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.97□□□□□ -1.77
APOC1P02654 AC087385.3-201ENST00000620477 187 ntBASIC3.97□□□□□ -1.77
APOC1P02654 AC018445.2-201ENST00000622987 260 ntBASIC3.97□□□□□ -1.77
APOC1P02654 AC107021.2-201ENST00000567714 2095 ntBASIC3.97□□□□□ -1.77
APOC1P02654 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
APOC1P02654 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
APOC1P02654 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
APOC1P02654 LINC00622-201ENST00000562811 1570 ntBASIC3.97□□□□□ -1.77
APOC1P02654 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
APOC1P02654 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
APOC1P02654 NXPH1-205ENST00000602349 1953 ntBASIC3.96□□□□□ -1.77
APOC1P02654 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
APOC1P02654 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
APOC1P02654 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
APOC1P02654 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.96□□□□□ -1.78
APOC1P02654 RNA5SP191-201ENST00000362585 102 ntBASIC3.96□□□□□ -1.78
APOC1P02654 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
APOC1P02654 RNU2-50P-201ENST00000410494 143 ntBASIC3.96□□□□□ -1.78
APOC1P02654 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.96□□□□□ -1.78
APOC1P02654 RPL7P53-201ENST00000421245 739 ntBASIC3.96□□□□□ -1.78
APOC1P02654 RPL7P4-203ENST00000430239 730 ntBASIC3.96□□□□□ -1.78
APOC1P02654 FTH1P6-201ENST00000430768 320 ntBASIC3.96□□□□□ -1.78
APOC1P02654 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.96□□□□□ -1.78
APOC1P02654 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.96□□□□□ -1.78
APOC1P02654 AC012671.1-201ENST00000451912 203 ntBASIC3.96□□□□□ -1.78
APOC1P02654 AC068305.1-201ENST00000497406 726 ntBASIC3.96□□□□□ -1.78
APOC1P02654 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.96□□□□□ -1.78
APOC1P02654 BRD9P1-201ENST00000529855 560 ntBASIC3.96□□□□□ -1.78
APOC1P02654 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.96□□□□□ -1.78
APOC1P02654 AGGF1P8-201ENST00000562979 1000 ntBASIC3.96□□□□□ -1.78
APOC1P02654 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.96□□□□□ -1.78
APOC1P02654 AC244505.7-201ENST00000599675 272 ntBASIC3.96□□□□□ -1.78
APOC1P02654 AL445222.1-201ENST00000607259 628 ntBASIC3.96□□□□□ -1.78
APOC1P02654 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.96□□□□□ -1.78
APOC1P02654 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.96□□□□□ -1.78
APOC1P02654 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.96□□□□□ -1.78
APOC1P02654 LINC01808-202ENST00000641680 1116 ntBASIC3.96□□□□□ -1.78
APOC1P02654 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
APOC1P02654 AC017007.4-201ENST00000503353 1352 ntBASIC3.96□□□□□ -1.78
APOC1P02654 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
APOC1P02654 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.96□□□□□ -1.78
APOC1P02654 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
APOC1P02654 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
APOC1P02654 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
APOC1P02654 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.95□□□□□ -1.78
APOC1P02654 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
APOC1P02654 AC139769.1-204ENST00000472297 1931 ntBASIC3.95□□□□□ -1.78
APOC1P02654 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.95□□□□□ -1.78
APOC1P02654 AC007685.1-201ENST00000329806 452 ntBASIC3.95□□□□□ -1.78
APOC1P02654 RNA5SP307-201ENST00000362863 116 ntBASIC3.95□□□□□ -1.78
APOC1P02654 RNU1-63P-201ENST00000383902 164 ntBASIC3.95□□□□□ -1.78
APOC1P02654 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms