Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AP002371.1-201ENST00000463604 433 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.43□□□□□ -1.7
SHOX2O60902 AC006463.2-201ENST00000473326 348 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 TRBV8-1-201ENST00000481590 279 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 AC069499.1-201ENST00000489433 509 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 RPL36AP41-201ENST00000493820 306 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.43□□□□□ -1.7
SHOX2O60902 HIGD1AP14-201ENST00000507617 282 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 RN7SKP66-201ENST00000516681 231 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 RNA5SP143-201ENST00000516936 115 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.43□□□□□ -1.7
SHOX2O60902 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.43□□□□□ -1.7
SHOX2O60902 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.43□□□□□ -1.7
SHOX2O60902 PDCD5P1-201ENST00000543528 309 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.43□□□□□ -1.7
SHOX2O60902 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.43□□□□□ -1.7
SHOX2O60902 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.43□□□□□ -1.7
SHOX2O60902 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.43□□□□□ -1.7
SHOX2O60902 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.43□□□□□ -1.7
SHOX2O60902 AL159169.2-201ENST00000610061 1269 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 AC015722.2-201ENST00000622210 551 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 AP000346.3-201ENST00000622821 210 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.43□□□□□ -1.7
SHOX2O60902 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SHOX2O60902 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHOX2O60902 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.43□□□□□ -1.7
SHOX2O60902 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHOX2O60902 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.43□□□□□ -1.7
SHOX2O60902 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHOX2O60902 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SHOX2O60902 HSPA8P1-201ENST00000425843 1833 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 PABPC1P6-201ENST00000445594 1829 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHOX2O60902 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHOX2O60902 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHOX2O60902 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SHOX2O60902 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHOX2O60902 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SHOX2O60902 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHOX2O60902 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
SHOX2O60902 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.42□□□□□ -1.7
SHOX2O60902 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.42□□□□□ -1.7
SHOX2O60902 AL603766.1-201ENST00000407763 664 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 Z98941.1-201ENST00000407764 100 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.42□□□□□ -1.7
SHOX2O60902 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.42□□□□□ -1.7
SHOX2O60902 RBMY1KP-201ENST00000423480 476 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 AL138787.1-202ENST00000437804 898 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.42□□□□□ -1.7
SHOX2O60902 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.42□□□□□ -1.7
SHOX2O60902 SLC25A18P1-201ENST00000449385 454 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.42□□□□□ -1.7
SHOX2O60902 OR52Y1P-201ENST00000452418 828 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 AC079841.1-201ENST00000481228 950 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 SNRPCP2-201ENST00000504370 475 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 AC004980.4-201ENST00000513375 203 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.42□□□□□ -1.7
SHOX2O60902 AC018442.3-201ENST00000523025 183 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.42□□□□□ -1.7
SHOX2O60902 AC004825.1-201ENST00000555068 586 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.42□□□□□ -1.7
SHOX2O60902 BNIP3P33-201ENST00000598912 569 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 AC020910.3-201ENST00000603701 874 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 AL139286.1-201ENST00000604465 483 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 AL391358.1-201ENST00000605342 190 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 AC093799.2-201ENST00000610062 578 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.42□□□□□ -1.7
SHOX2O60902 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.42□□□□□ -1.7
SHOX2O60902 AC022893.2-201ENST00000564832 3296 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHOX2O60902 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.42□□□□□ -1.7
SHOX2O60902 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHOX2O60902 THAP12P4-201ENST00000528321 2266 ntBASIC4.42□□□□□ -1.7
SHOX2O60902 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHOX2O60902 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHOX2O60902 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
SHOX2O60902 MTND4P10-201ENST00000446199 1363 ntBASIC4.41□□□□□ -1.7
SHOX2O60902 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.41□□□□□ -1.7
SHOX2O60902 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHOX2O60902 MIR423-201ENST00000362201 94 ntBASIC4.41□□□□□ -1.7
SHOX2O60902 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.41□□□□□ -1.7
SHOX2O60902 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SHOX2O60902 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.41□□□□□ -1.7
SHOX2O60902 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.41□□□□□ -1.7
SHOX2O60902 RPL23AP27-201ENST00000415161 451 ntBASIC4.41□□□□□ -1.7
SHOX2O60902 RPS26P40-201ENST00000435209 294 ntBASIC4.41□□□□□ -1.7
SHOX2O60902 CYCSP11-201ENST00000436426 315 ntBASIC4.41□□□□□ -1.7
SHOX2O60902 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.41□□□□□ -1.7
SHOX2O60902 AC004815.1-201ENST00000484185 331 ntBASIC4.41□□□□□ -1.7
SHOX2O60902 AC004453.1-201ENST00000487895 408 ntBASIC4.41□□□□□ -1.7
SHOX2O60902 IGLV2-34-201ENST00000490007 283 ntBASIC4.41□□□□□ -1.7
SHOX2O60902 RN7SL604P-201ENST00000492589 296 ntBASIC4.41□□□□□ -1.7
SHOX2O60902 AC083829.1-201ENST00000503756 657 ntBASIC4.41□□□□□ -1.7
SHOX2O60902 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.41□□□□□ -1.7
SHOX2O60902 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.41□□□□□ -1.7
SHOX2O60902 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.41□□□□□ -1.7
SHOX2O60902 AC092490.3-201ENST00000545370 572 ntBASIC4.41□□□□□ -1.7
SHOX2O60902 AL110118.1-201ENST00000553543 400 ntBASIC4.41□□□□□ -1.7
SHOX2O60902 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms