Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 GAPDHP42-201ENST00000406848 981 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.28□□□□□ -1.56
PROM1O43490 AL590806.1-201ENST00000415818 853 ntBASIC5.28□□□□□ -1.56
PROM1O43490 BMS1P17-202ENST00000416720 316 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AL121878.1-201ENST00000418638 859 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.28□□□□□ -1.56
PROM1O43490 GNG5P5-201ENST00000420444 220 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AC007161.1-204ENST00000423039 460 ntBASIC5.28□□□□□ -1.56
PROM1O43490 MTCO3P30-201ENST00000426425 670 ntBASIC5.28□□□□□ -1.56
PROM1O43490 HSPE1P16-201ENST00000426640 348 ntBASIC5.28□□□□□ -1.56
PROM1O43490 DLGAP5P1-201ENST00000430307 464 ntBASIC5.28□□□□□ -1.56
PROM1O43490 ELOCP8-201ENST00000439309 332 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.28□□□□□ -1.56
PROM1O43490 ELOCP15-201ENST00000442090 332 ntBASIC5.28□□□□□ -1.56
PROM1O43490 LINC02210-201ENST00000444561 288 ntBASIC5.28□□□□□ -1.56
PROM1O43490 MTND2P19-201ENST00000449129 1012 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AL591363.1-201ENST00000450091 483 ntBASIC5.28□□□□□ -1.56
PROM1O43490 CBX1P2-201ENST00000453841 458 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.28□□□□□ -1.56
PROM1O43490 RN7SL515P-201ENST00000463999 297 ntBASIC5.28□□□□□ -1.56
PROM1O43490 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.28□□□□□ -1.56
PROM1O43490 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.28□□□□□ -1.56
PROM1O43490 RPSAP51-201ENST00000497462 645 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.28□□□□□ -1.56
PROM1O43490 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.28□□□□□ -1.56
PROM1O43490 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.28□□□□□ -1.56
PROM1O43490 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.28□□□□□ -1.56
PROM1O43490 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.28□□□□□ -1.56
PROM1O43490 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.28□□□□□ -1.56
PROM1O43490 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.28□□□□□ -1.56
PROM1O43490 AC008494.2-201ENST00000514544 370 ntBASIC5.28□□□□□ -1.56
PROM1O43490 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
PROM1O43490 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.28□□□□□ -1.56
PROM1O43490 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.28□□□□□ -1.56
PROM1O43490 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.28□□□□□ -1.56
PROM1O43490 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.28□□□□□ -1.56
PROM1O43490 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.28□□□□□ -1.56
PROM1O43490 OR5AK3P-201ENST00000527486 1297 ntBASIC5.28□□□□□ -1.56
PROM1O43490 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.28□□□□□ -1.56
PROM1O43490 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.28□□□□□ -1.56
PROM1O43490 NBEAP1-201ENST00000554452 979 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.28□□□□□ -1.56
PROM1O43490 ATP5F1P7-201ENST00000567330 760 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AC007599.1-201ENST00000568688 1174 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AC012213.3-201ENST00000577199 777 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.28□□□□□ -1.56
PROM1O43490 MIR5708-201ENST00000579723 85 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AP001542.2-201ENST00000593141 364 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.28□□□□□ -1.56
PROM1O43490 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AL589674.2-201ENST00000604304 337 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AC106791.2-201ENST00000604680 391 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AC011374.2-201ENST00000607135 526 ntBASIC5.28□□□□□ -1.56
PROM1O43490 OR2BH1P-201ENST00000608850 864 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AC009163.6-201ENST00000612367 342 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AC122133.1-201ENST00000613964 233 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AC025574.2-201ENST00000615621 514 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AC090246.1-201ENST00000616499 426 ntBASIC5.28□□□□□ -1.56
PROM1O43490 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.28□□□□□ -1.56
PROM1O43490 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.28□□□□□ -1.56
PROM1O43490 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.28□□□□□ -1.56
PROM1O43490 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.28□□□□□ -1.56
PROM1O43490 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 AC114786.1-201ENST00000512892 1415 ntBASIC5.28□□□□□ -1.56
PROM1O43490 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.28□□□□□ -1.56
PROM1O43490 AC083843.2-201ENST00000568248 6253 ntBASIC5.28□□□□□ -1.56
PROM1O43490 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
PROM1O43490 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.28□□□□□ -1.56
PROM1O43490 SGO1P2-201ENST00000429458 1589 ntBASIC5.28□□□□□ -1.56
PROM1O43490 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.28□□□□□ -1.56
PROM1O43490 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 CASC19-284ENST00000642142 1868 ntBASIC5.28□□□□□ -1.56
PROM1O43490 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PROM1O43490 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PROM1O43490 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PROM1O43490 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PROM1O43490 AC083899.1-201ENST00000454465 3819 ntBASIC5.27□□□□□ -1.57
PROM1O43490 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PROM1O43490 AC010329.2-201ENST00000595195 2737 ntBASIC5.27□□□□□ -1.57
PROM1O43490 AC104964.3-201ENST00000606115 2860 ntBASIC5.27□□□□□ -1.57
PROM1O43490 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PROM1O43490 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.27□□□□□ -1.57
PROM1O43490 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PROM1O43490 FAM3C2-201ENST00000312214 681 ntBASIC5.27□□□□□ -1.57
PROM1O43490 OR9K1P-201ENST00000326513 941 ntBASIC5.27□□□□□ -1.57
PROM1O43490 RN7SKP160-201ENST00000363804 340 ntBASIC5.27□□□□□ -1.57
PROM1O43490 SNORA58B-201ENST00000364259 136 ntBASIC5.27□□□□□ -1.57
PROM1O43490 RNU6-192P-201ENST00000391253 100 ntBASIC5.27□□□□□ -1.57
PROM1O43490 RPS3AP26-201ENST00000398259 784 ntBASIC5.27□□□□□ -1.57
PROM1O43490 AL121978.1-201ENST00000402778 359 ntBASIC5.27□□□□□ -1.57
PROM1O43490 Y_RNA.599-201ENST00000410489 109 ntBASIC5.27□□□□□ -1.57
PROM1O43490 OR2AT2P-201ENST00000413438 905 ntBASIC5.27□□□□□ -1.57
PROM1O43490 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.27□□□□□ -1.57
PROM1O43490 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms