Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 BRWD1P3-201ENST00000428816 390 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM1O00151 PTMAP6-201ENST00000439110 327 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 CASP3P1-201ENST00000446037 609 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 HMGB1P16-201ENST00000447155 540 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AL354714.3-201ENST00000447284 493 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AC073850.1-201ENST00000449243 255 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 IGHV5-78-201ENST00000450948 295 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 MTND2P3-201ENST00000452458 470 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 RPL23AP71-201ENST00000470966 469 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AC025181.1-201ENST00000477507 416 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 RPL7AP6-201ENST00000477943 801 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.51□□□□□ -1.69
PDLIM1O00151 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.51□□□□□ -1.69
PDLIM1O00151 MIR2114-201ENST00000516645 80 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.51□□□□□ -1.69
PDLIM1O00151 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.51□□□□□ -1.69
PDLIM1O00151 IFITM8P-201ENST00000522529 394 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AC013701.1-201ENST00000522657 465 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
PDLIM1O00151 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.51□□□□□ -1.69
PDLIM1O00151 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.51□□□□□ -1.69
PDLIM1O00151 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PDLIM1O00151 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.51□□□□□ -1.69
PDLIM1O00151 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM1O00151 AC044860.2-201ENST00000561005 179 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.51□□□□□ -1.69
PDLIM1O00151 AC124068.1-201ENST00000563131 678 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.51□□□□□ -1.69
PDLIM1O00151 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM1O00151 AC130352.1-201ENST00000602979 661 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AC087763.1-201ENST00000603391 286 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AC087783.2-201ENST00000605070 562 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AL021368.1-201ENST00000607490 540 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AC211433.2-201ENST00000608433 387 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AL627230.1-201ENST00000613077 211 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AL591926.8-201ENST00000616876 211 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AL162233.1-201ENST00000620014 944 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AC068870.2-201ENST00000620635 389 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AP002799.1-201ENST00000623552 423 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AC019080.5-201ENST00000624891 757 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 AC092159.4-201ENST00000624944 550 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM1O00151 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.51□□□□□ -1.69
PDLIM1O00151 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM1O00151 AC016588.2-201ENST00000632484 3021 ntBASIC4.51□□□□□ -1.69
PDLIM1O00151 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM1O00151 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM1O00151 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.51□□□□□ -1.69
PDLIM1O00151 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PDLIM1O00151 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM1O00151 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM1O00151 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM1O00151 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.5□□□□□ -1.69
PDLIM1O00151 AC110792.3-201ENST00000595906 1614 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PDLIM1O00151 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM1O00151 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM1O00151 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.5□□□□□ -1.69
PDLIM1O00151 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM1O00151 AL589826.1-201ENST00000340697 249 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM1O00151 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM1O00151 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM1O00151 AL034403.1-201ENST00000399414 885 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 AL357515.1-201ENST00000402967 542 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 OR6K4P-201ENST00000423179 955 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 AC007563.3-201ENST00000433233 371 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 PRPF38AP2-201ENST00000438179 851 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.5□□□□□ -1.69
PDLIM1O00151 SLC25A18P1-201ENST00000449385 454 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.5□□□□□ -1.69
PDLIM1O00151 RN7SL808P-201ENST00000496066 299 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.5□□□□□ -1.69
PDLIM1O00151 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.5□□□□□ -1.69
PDLIM1O00151 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.5□□□□□ -1.69
PDLIM1O00151 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
PDLIM1O00151 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.5□□□□□ -1.69
PDLIM1O00151 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM1O00151 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM1O00151 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.5□□□□□ -1.69
PDLIM1O00151 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.5□□□□□ -1.69
PDLIM1O00151 CBX3P5-201ENST00000552017 521 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.5□□□□□ -1.69
PDLIM1O00151 SNRPGP1-201ENST00000553864 222 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 AC007424.1-203ENST00000554613 687 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 AC141257.3-201ENST00000572906 215 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.5□□□□□ -1.69
PDLIM1O00151 AC005520.3-201ENST00000602874 370 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 AL354696.1-201ENST00000614652 497 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 AC104307.1-201ENST00000616142 196 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.5□□□□□ -1.69
PDLIM1O00151 AC006453.5-201ENST00000636451 619 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 OR5AC4P-202ENST00000642086 985 ntBASIC4.5□□□□□ -1.69
PDLIM1O00151 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM1O00151 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PDLIM1O00151 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.5□□□□□ -1.69
PDLIM1O00151 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM1O00151 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms