Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RPS27P18-201ENST00000431701 247 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 RABEPKP1-201ENST00000440529 1026 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 RPL36AP39-201ENST00000445859 318 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 RPL31P44-201ENST00000447680 377 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AC005077.1-201ENST00000449226 375 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AL139156.3-201ENST00000454802 394 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AL133351.3-201ENST00000454998 193 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 PFN1P6-201ENST00000476786 399 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 RN7SL326P-201ENST00000477493 296 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 PABPC1P1-201ENST00000506347 591 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 IGHV3-63-201ENST00000518422 341 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 TPRX1P1-201ENST00000557620 319 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AC025678.1-201ENST00000567861 338 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AC136618.2-201ENST00000575091 400 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 RN7SL475P-201ENST00000583379 298 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 AL050343.2-201ENST00000607338 280 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 MKKS-204ENST00000639674 192 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 SAMMSON-227ENST00000642114 1199 ntBASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
ZC3H4Q9UPT8 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 AC007342.5-201ENST00000571340 2142 ntBASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 Z93929.1-201ENST00000418200 1475 ntBASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 RN7SKP162-201ENST00000363605 345 ntBASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 RNU6-98P-201ENST00000384173 107 ntBASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 RNU6-185P-201ENST00000384421 107 ntBASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 AC062016.2-201ENST00000420950 676 ntBASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 MTND2P23-201ENST00000422990 651 ntBASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 GAPDHP58-201ENST00000438477 1006 ntBASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 AC108463.1-201ENST00000450258 347 ntBASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 ACTR3P3-201ENST00000480448 893 ntBASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 RNA5SP434-201ENST00000516647 121 ntBASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 AL589674.2-201ENST00000604304 337 ntBASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 MEMO1P5-201ENST00000604810 406 ntBASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 AC002550.2-201ENST00000621246 394 ntBASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
ZC3H4Q9UPT8 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
ZC3H4Q9UPT8 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.74□□□□□ -1.17
ZC3H4Q9UPT8 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
ZC3H4Q9UPT8 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
ZC3H4Q9UPT8 MT-RNR2-201ENST00000387347 1559 ntBASIC7.74□□□□□ -1.17
ZC3H4Q9UPT8 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
ZC3H4Q9UPT8 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.74□□□□□ -1.17
ZC3H4Q9UPT8 AC132219.2-201ENST00000624416 2327 ntBASIC7.74□□□□□ -1.17
ZC3H4Q9UPT8 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
ZC3H4Q9UPT8 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
ZC3H4Q9UPT8 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
ZC3H4Q9UPT8 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
ZC3H4Q9UPT8 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7.74□□□□□ -1.17
ZC3H4Q9UPT8 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
ZC3H4Q9UPT8 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
ZC3H4Q9UPT8 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
ZC3H4Q9UPT8 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms