Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 RNU6-709P-201ENST00000517257 104 ntBASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 HIGD1AP18-201ENST00000520730 278 ntBASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 AC009643.1-201ENST00000532030 391 ntBASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 AC022882.1-201ENST00000532142 501 ntBASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 LSM3P2-201ENST00000551246 273 ntBASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 RN7SL690P-201ENST00000582087 240 ntBASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 MIR5096-201ENST00000583713 70 ntBASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 AC079791.1-201ENST00000605356 973 ntBASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 AC016911.1-201ENST00000613297 452 ntBASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 CASC19-206ENST00000641028 1430 ntBASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 KARSP3-201ENST00000571212 1504 ntBASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 AL132640.2-201ENST00000559968 1698 ntBASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPIPA1Q9UND3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 IGKV7-3-201ENST00000357453 298 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 RNU6-532P-201ENST00000384318 107 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 NCSTNP1-201ENST00000406229 144 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 RNA5SP345-201ENST00000410646 108 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AL512504.1-201ENST00000415494 778 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AL590609.2-201ENST00000421430 368 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 RPL36AP10-201ENST00000421785 322 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 EIF4HP2-201ENST00000424380 563 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 CKS1BP6-201ENST00000424932 240 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AL451139.1-201ENST00000434718 346 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AC099063.2-201ENST00000446360 662 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 MTND2P28-201ENST00000457540 1044 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 FTH1P2-201ENST00000466086 412 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AC020890.1-201ENST00000491837 504 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AC091868.1-201ENST00000508746 304 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 MIR4715-201ENST00000584117 79 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 MIMT1-201ENST00000597105 1050 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AC009704.2-201ENST00000618739 483 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AL136164.3-201ENST00000624429 3978 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 DHX40P1-201ENST00000588725 1412 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AL442639.1-201ENST00000625030 1899 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 AL450326.2-201ENST00000421913 1962 ntBASIC4.34□□□□□ -1.71
NPIPA1Q9UND3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
NPIPA1Q9UND3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.34□□□□□ -1.72
NPIPA1Q9UND3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NPIPA1Q9UND3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.34□□□□□ -1.72
NPIPA1Q9UND3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
NPIPA1Q9UND3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AC025574.1-201ENST00000554784 1653 ntBASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.33□□□□□ -1.72
NPIPA1Q9UND3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms