Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SALL4Q9UJQ4 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.67□□□□□ -1.34
SALL4Q9UJQ4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.67□□□□□ -1.34
SALL4Q9UJQ4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SALL4Q9UJQ4 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 Y_RNA.25-201ENST00000362528 102 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 RNU6-582P-201ENST00000362989 107 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 RNA5SP85-201ENST00000365378 119 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 SNORA64.3-201ENST00000365647 134 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 RPL31P1-201ENST00000398116 372 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AL512422.1-201ENST00000407033 553 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 RN7SKP151-201ENST00000410230 316 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 RNU4-55P-201ENST00000410731 137 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC092651.1-201ENST00000426110 312 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 BMS1P10-201ENST00000443754 1120 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 VPS25P1-201ENST00000455691 508 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC091564.1-201ENST00000464563 479 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC099521.1-201ENST00000482557 334 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 RPL15P21-201ENST00000495592 567 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 NDUFA5P12-201ENST00000503796 343 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC093664.1-201ENST00000511779 289 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC105914.1-201ENST00000511798 226 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 RN7SKP67-201ENST00000515905 235 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 RNA5SP473-201ENST00000516402 125 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC008126.1-201ENST00000549019 480 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 MIR5697-201ENST00000578045 78 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 MIR4271-201ENST00000582451 67 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC005332.4-201ENST00000592752 579 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC006924.1-201ENST00000610750 559 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC068726.1-201ENST00000610993 341 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 MIR7854-201ENST00000620068 65 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AL445264.1-201ENST00000621719 171 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 AC068880.5-201ENST00000624331 290 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 QRSL1P1-201ENST00000400977 1540 ntBASIC6.66□□□□□ -1.34
SALL4Q9UJQ4 MAPK10-261ENST00000641050 3109 ntBASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 SNORD16-201ENST00000362803 99 ntBASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 Y_RNA.97-201ENST00000363094 102 ntBASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 RN7SKP171-201ENST00000364417 303 ntBASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 RNU1-84P-201ENST00000365447 164 ntBASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 GNG5P2-201ENST00000372054 207 ntBASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 RNU6-780P-201ENST00000391030 104 ntBASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 RPS3AP36-201ENST00000398190 775 ntBASIC6.65□□□□□ -1.34
SALL4Q9UJQ4 RPL23AP17-201ENST00000401064 499 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms