Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 RPL23AP2-201ENST00000471227 466 ntBASIC5.42□□□□□ -1.54
SCN11AQ9UI33 RPL23AP65-201ENST00000475608 468 ntBASIC5.42□□□□□ -1.54
SCN11AQ9UI33 RPS29P19-201ENST00000479709 171 ntBASIC5.42□□□□□ -1.54
SCN11AQ9UI33 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 CYCSP28-201ENST00000534284 321 ntBASIC5.42□□□□□ -1.54
SCN11AQ9UI33 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 VPS35P1-201ENST00000563400 1518 ntBASIC5.42□□□□□ -1.54
SCN11AQ9UI33 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 Y_RNA.333-201ENST00000365274 102 ntBASIC5.42□□□□□ -1.54
SCN11AQ9UI33 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 AC006011.1-201ENST00000442758 349 ntBASIC5.42□□□□□ -1.54
SCN11AQ9UI33 RPL38P1-201ENST00000460914 211 ntBASIC5.42□□□□□ -1.54
SCN11AQ9UI33 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 KRT19P6-201ENST00000510983 209 ntBASIC5.42□□□□□ -1.54
SCN11AQ9UI33 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 AGGF1P6-201ENST00000569213 976 ntBASIC5.42□□□□□ -1.54
SCN11AQ9UI33 AC110743.1-201ENST00000584870 478 ntBASIC5.42□□□□□ -1.54
SCN11AQ9UI33 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.42□□□□□ -1.54
SCN11AQ9UI33 NCOA4P2-201ENST00000340589 1813 ntBASIC5.41□□□□□ -1.54
SCN11AQ9UI33 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 AC003985.2-201ENST00000562268 1669 ntBASIC5.41□□□□□ -1.54
SCN11AQ9UI33 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 AL513548.1-201ENST00000562904 1724 ntBASIC5.41□□□□□ -1.54
SCN11AQ9UI33 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.41□□□□□ -1.54
SCN11AQ9UI33 PRELID3BP10-201ENST00000431957 584 ntBASIC5.41□□□□□ -1.54
SCN11AQ9UI33 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 RPL5P32-201ENST00000454085 879 ntBASIC5.41□□□□□ -1.54
SCN11AQ9UI33 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 RNU6-352P-201ENST00000516908 107 ntBASIC5.41□□□□□ -1.54
SCN11AQ9UI33 AC090151.1-201ENST00000520784 730 ntBASIC5.41□□□□□ -1.54
SCN11AQ9UI33 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 AL352979.3-201ENST00000553515 247 ntBASIC5.41□□□□□ -1.54
SCN11AQ9UI33 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 MIR6500-201ENST00000622700 86 ntBASIC5.41□□□□□ -1.54
SCN11AQ9UI33 AC005086.4-201ENST00000623065 213 ntBASIC5.41□□□□□ -1.54
SCN11AQ9UI33 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SCN11AQ9UI33 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SCN11AQ9UI33 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
SCN11AQ9UI33 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SCN11AQ9UI33 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SCN11AQ9UI33 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SCN11AQ9UI33 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
SCN11AQ9UI33 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SCN11AQ9UI33 MIR1179-201ENST00000408703 91 ntBASIC5.4□□□□□ -1.54
SCN11AQ9UI33 VDAC1P9-201ENST00000412766 841 ntBASIC5.4□□□□□ -1.54
SCN11AQ9UI33 AC093578.1-201ENST00000415219 368 ntBASIC5.4□□□□□ -1.54
SCN11AQ9UI33 RPL23AP25-201ENST00000430973 463 ntBASIC5.4□□□□□ -1.54
SCN11AQ9UI33 AL445584.1-201ENST00000431451 330 ntBASIC5.4□□□□□ -1.54
SCN11AQ9UI33 AC112206.1-201ENST00000468416 477 ntBASIC5.4□□□□□ -1.54
SCN11AQ9UI33 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.4□□□□□ -1.54
SCN11AQ9UI33 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.4□□□□□ -1.54
SCN11AQ9UI33 AC138938.1-201ENST00000515431 782 ntBASIC5.4□□□□□ -1.54
SCN11AQ9UI33 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.4□□□□□ -1.54
SCN11AQ9UI33 CCNG2P1-201ENST00000549521 1000 ntBASIC5.4□□□□□ -1.54
SCN11AQ9UI33 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.4□□□□□ -1.54
SCN11AQ9UI33 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.4□□□□□ -1.54
SCN11AQ9UI33 RN7SL435P-201ENST00000584418 282 ntBASIC5.4□□□□□ -1.54
SCN11AQ9UI33 BNIP3P11-201ENST00000603878 563 ntBASIC5.4□□□□□ -1.54
SCN11AQ9UI33 AC114878.2-201ENST00000604863 1251 ntBASIC5.4□□□□□ -1.54
SCN11AQ9UI33 AC126323.6-202ENST00000568092 3511 ntBASIC5.4□□□□□ -1.54
SCN11AQ9UI33 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.4□□□□□ -1.54
SCN11AQ9UI33 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SCN11AQ9UI33 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.4□□□□□ -1.55
SCN11AQ9UI33 USP9YP4-201ENST00000424401 1745 ntBASIC5.4□□□□□ -1.55
SCN11AQ9UI33 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SCN11AQ9UI33 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.4□□□□□ -1.55
SCN11AQ9UI33 AL672167.1-203ENST00000641299 2975 ntBASIC5.4□□□□□ -1.55
SCN11AQ9UI33 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.4□□□□□ -1.55
SCN11AQ9UI33 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SCN11AQ9UI33 TCP11X1-202ENST00000622971 1372 ntBASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms