Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MORF4L1P4-201ENST00000450245 976 ntBASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 SEPT7P6-201ENST00000469999 1143 ntBASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AC091917.2-201ENST00000505002 744 ntBASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AC134698.5-201ENST00000519444 336 ntBASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AC008676.3-201ENST00000521237 435 ntBASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 ATP5J2P6-201ENST00000565203 266 ntBASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AL356218.2-201ENST00000605264 187 ntBASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 COX6CP4-201ENST00000605798 228 ntBASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AP005019.3-201ENST00000620418 560 ntBASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 MAPK10-303ENST00000641324 3959 ntBASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AC005332.5-201ENST00000591222 2919 ntBASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP2Q9UDT6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 AL080315.1-201ENST00000406055 466 ntBASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 AC073143.1-201ENST00000436316 395 ntBASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 ISCUP1-201ENST00000454451 448 ntBASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 RPL21P126-201ENST00000470049 478 ntBASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 AC026979.1-201ENST00000492525 396 ntBASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 RN7SL176P-201ENST00000580352 264 ntBASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 AC115286.1-201ENST00000604298 434 ntBASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 AL135786.2-201ENST00000608422 615 ntBASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 AL445423.1-201ENST00000609941 536 ntBASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 AC083809.1-201ENST00000615051 472 ntBASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.37□□□□□ -1.55
CLIP2Q9UDT6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 FAM3C2-201ENST00000312214 681 ntBASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 RNU1-20P-201ENST00000363314 162 ntBASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 RNA5SP372-201ENST00000390836 115 ntBASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 RPL23AP59-201ENST00000399415 461 ntBASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 AL592293.2-201ENST00000422292 996 ntBASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 AC004448.2-201ENST00000422360 586 ntBASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 AC091390.1-201ENST00000433904 331 ntBASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 Z95152.1-201ENST00000453556 656 ntBASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 RN7SL809P-201ENST00000482040 297 ntBASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 AC025674.1-201ENST00000507074 324 ntBASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 SNORA26.10-201ENST00000516427 141 ntBASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 AC005191.1-201ENST00000603950 358 ntBASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 AC091979.2-201ENST00000607514 214 ntBASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 AC012409.3-201ENST00000611343 981 ntBASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CLIP2Q9UDT6 LINC01109-201ENST00000603837 3081 ntBASIC5.35□□□□□ -1.55
CLIP2Q9UDT6 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLIP2Q9UDT6 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLIP2Q9UDT6 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CLIP2Q9UDT6 VPS35P1-201ENST00000563400 1518 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms