Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MIR217-201ENST00000384817 110 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 RNU1-77P-201ENST00000390868 162 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LRFN1Q9P244 RPL35AP24-201ENST00000413846 330 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC092651.1-201ENST00000426110 312 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 MTCO1P54-201ENST00000430139 712 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 USP24P1-201ENST00000433802 779 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC023347.2-201ENST00000433994 462 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 AL591623.2-201ENST00000449978 222 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 RPL12P39-201ENST00000455456 496 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 DYNLL1P6-201ENST00000503440 264 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC006499.3-201ENST00000506077 748 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC114322.1-201ENST00000506771 926 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LRFN1Q9P244 AL049779.2-201ENST00000553847 315 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC019322.1-201ENST00000571869 389 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 H3F3BP2-201ENST00000583907 357 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AP001269.3-201ENST00000588718 329 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC008687.2-201ENST00000597865 520 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC069545.1-201ENST00000605671 358 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AL512329.2-201ENST00000607350 548 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC090948.2-201ENST00000607363 564 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC000068.2-201ENST00000608816 460 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC024257.5-201ENST00000612739 531 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC136428.4-201ENST00000634254 1155 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LRFN1Q9P244 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.09□□□□□ -1.6
LRFN1Q9P244 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.09□□□□□ -1.6
LRFN1Q9P244 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRFN1Q9P244 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRFN1Q9P244 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC093535.2-201ENST00000624769 2326 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRFN1Q9P244 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC007529.1-201ENST00000418574 2178 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRFN1Q9P244 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRFN1Q9P244 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRFN1Q9P244 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 KYNUP3-201ENST00000574386 1341 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRFN1Q9P244 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 AL133325.1-201ENST00000421090 382 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 Z93242.1-201ENST00000427102 353 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 RPL12P28-201ENST00000430852 489 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 NANOGP9-201ENST00000439890 892 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 RPL23AP15-201ENST00000450202 459 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 MTND6P6-201ENST00000478031 263 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 VPS26AP1-201ENST00000483197 979 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC084024.2-201ENST00000503480 791 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC098862.1-201ENST00000504991 413 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 RPL7L1P13-201ENST00000511702 739 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 RNA5SP92-201ENST00000516437 110 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 OR5M2P-201ENST00000529003 936 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 OR10G5P-201ENST00000532733 358 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC063949.1-201ENST00000552900 865 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC127381.1-201ENST00000555979 939 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC090695.1-201ENST00000561269 1222 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC025857.2-201ENST00000602711 238 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC113368.1-201ENST00000603736 382 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 AP003973.1-201ENST00000604639 691 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC037198.3-201ENST00000616754 526 ntBASIC5.08□□□□□ -1.6
LRFN1Q9P244 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
LRFN1Q9P244 AC109809.1-201ENST00000619665 545 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms