Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 AC010469.1-201ENST00000463864 576 ntBASIC4.16□□□□□ -1.74
VAPAQ9P0L0 AC093270.2-201ENST00000486157 792 ntBASIC4.16□□□□□ -1.74
VAPAQ9P0L0 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 RNA5SP154-201ENST00000516193 111 ntBASIC4.16□□□□□ -1.74
VAPAQ9P0L0 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 OR1F2P-201ENST00000570470 933 ntBASIC4.16□□□□□ -1.74
VAPAQ9P0L0 MIR4737-201ENST00000583979 81 ntBASIC4.16□□□□□ -1.74
VAPAQ9P0L0 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.16□□□□□ -1.74
VAPAQ9P0L0 AC105105.5-201ENST00000622635 1294 ntBASIC4.16□□□□□ -1.74
VAPAQ9P0L0 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 AC016588.2-201ENST00000632484 3021 ntBASIC4.16□□□□□ -1.74
VAPAQ9P0L0 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.16□□□□□ -1.74
VAPAQ9P0L0 AC011266.1-201ENST00000624119 3569 ntBASIC4.15□□□□□ -1.74
VAPAQ9P0L0 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
VAPAQ9P0L0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
VAPAQ9P0L0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
VAPAQ9P0L0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
VAPAQ9P0L0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
VAPAQ9P0L0 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.15□□□□□ -1.74
VAPAQ9P0L0 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
VAPAQ9P0L0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
VAPAQ9P0L0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 RHOT1P2-201ENST00000366423 333 ntBASIC4.15□□□□□ -1.75
VAPAQ9P0L0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.15□□□□□ -1.75
VAPAQ9P0L0 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 AC093084.1-201ENST00000424233 687 ntBASIC4.15□□□□□ -1.75
VAPAQ9P0L0 AC016724.1-201ENST00000453215 421 ntBASIC4.15□□□□□ -1.75
VAPAQ9P0L0 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.15□□□□□ -1.75
VAPAQ9P0L0 APOOP2-201ENST00000461561 539 ntBASIC4.15□□□□□ -1.75
VAPAQ9P0L0 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 OR51K1P-201ENST00000510214 950 ntBASIC4.15□□□□□ -1.75
VAPAQ9P0L0 MYL12AP1-201ENST00000518490 515 ntBASIC4.15□□□□□ -1.75
VAPAQ9P0L0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 IGLV2-28-201ENST00000520681 304 ntBASIC4.15□□□□□ -1.75
VAPAQ9P0L0 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 AC091042.1-201ENST00000579213 173 ntBASIC4.15□□□□□ -1.75
VAPAQ9P0L0 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 AL592494.3-201ENST00000609485 464 ntBASIC4.15□□□□□ -1.75
VAPAQ9P0L0 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 AL356121.2-201ENST00000624715 780 ntBASIC4.15□□□□□ -1.75
VAPAQ9P0L0 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 AC090971.4-201ENST00000560291 1800 ntBASIC4.15□□□□□ -1.75
VAPAQ9P0L0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VAPAQ9P0L0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 MAPK10-304ENST00000641341 3984 ntBASIC4.14□□□□□ -1.75
VAPAQ9P0L0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 SDAD1P1-202ENST00000524156 2051 ntBASIC4.14□□□□□ -1.75
VAPAQ9P0L0 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 SNORD66.1-201ENST00000391230 76 ntBASIC4.14□□□□□ -1.75
VAPAQ9P0L0 GLULP6-201ENST00000399502 913 ntBASIC4.14□□□□□ -1.75
VAPAQ9P0L0 AC010740.1-201ENST00000417035 684 ntBASIC4.14□□□□□ -1.75
VAPAQ9P0L0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 RPS26P47-201ENST00000427219 348 ntBASIC4.14□□□□□ -1.75
VAPAQ9P0L0 RPL36AP15-201ENST00000444514 266 ntBASIC4.14□□□□□ -1.75
VAPAQ9P0L0 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 AL121877.1-201ENST00000453704 622 ntBASIC4.14□□□□□ -1.75
VAPAQ9P0L0 AC069277.2-201ENST00000454211 432 ntBASIC4.14□□□□□ -1.75
VAPAQ9P0L0 AC091685.2-201ENST00000454924 864 ntBASIC4.14□□□□□ -1.75
VAPAQ9P0L0 AC011005.3-201ENST00000491624 395 ntBASIC4.14□□□□□ -1.75
VAPAQ9P0L0 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 UBE2FP2-201ENST00000566646 462 ntBASIC4.14□□□□□ -1.75
VAPAQ9P0L0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 SNX6P1-201ENST00000601728 1224 ntBASIC4.14□□□□□ -1.75
VAPAQ9P0L0 MIR432-201ENST00000606207 94 ntBASIC4.14□□□□□ -1.75
VAPAQ9P0L0 AC007390.2-201ENST00000606229 3803 ntBASIC4.14□□□□□ -1.75
VAPAQ9P0L0 AC133644.2-201ENST00000608142 540 ntBASIC4.14□□□□□ -1.75
VAPAQ9P0L0 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 AC016769.4-201ENST00000616893 535 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms