Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RNU6-1068P-201ENST00000410958 103 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 MTND4LP17-201ENST00000414607 293 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AC073335.1-201ENST00000427776 363 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 FTLP17-201ENST00000432567 525 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 RPL23AP16-201ENST00000441715 421 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 RPL26P28-201ENST00000451325 435 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AL354710.1-201ENST00000453641 246 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 RPL18AP17-201ENST00000455326 198 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 BTF3P15-201ENST00000455606 336 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 RPS27AP17-201ENST00000463344 455 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 POU5F1P7-201ENST00000508759 541 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AC105417.1-201ENST00000514691 285 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 SNORD60.2-201ENST00000516883 86 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 SCARNA11.1-201ENST00000516918 132 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 RNU6-988P-201ENST00000519081 107 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 SLC2A13P1-201ENST00000531560 322 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 OR7E161P-201ENST00000533722 967 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AC063950.1-201ENST00000552036 308 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AL109628.1-201ENST00000556877 366 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 CKS1BP3-201ENST00000600888 237 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AC234782.5-201ENST00000617723 324 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 OR1N1-202ENST00000619659 939 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AC026108.1-201ENST00000635444 547 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AL356585.10-201ENST00000641883 123 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AC046144.1-201ENST00000478559 1853 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AC006378.2-201ENST00000623178 2476 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 CASC19-221ENST00000641309 1382 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 RNU6-619P-201ENST00000365146 108 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 SNORA32.2-201ENST00000384049 122 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 RNU6-1222P-201ENST00000384615 107 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AL592114.1-201ENST00000403842 483 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 GSTA6P-201ENST00000424144 582 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 UQCRHP1-204ENST00000424609 274 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 RPS7P5-201ENST00000441482 581 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 FHP1-201ENST00000442741 703 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 PRDX1P1-201ENST00000449329 596 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 CFL1P4-201ENST00000451536 498 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 BX248409.1-201ENST00000455497 255 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AC103563.5-201ENST00000455643 364 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 MRE11P1-201ENST00000464884 2127 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AC091982.1-202ENST00000473923 343 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 MYL6P4-201ENST00000477911 453 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AL117692.1-201ENST00000494283 713 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AL035404.1-201ENST00000497982 568 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 Y_RNA.718-201ENST00000517110 102 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 BTF3P12-201ENST00000519620 469 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AC023442.1-201ENST00000531247 422 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 NANOGNBP2-201ENST00000544753 553 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 SUB1P2-201ENST00000556401 297 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AL031846.1-201ENST00000560933 314 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 SULT1C2P2-201ENST00000562517 294 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms