Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC091057.2-201ENST00000602594 792 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AL137072.1-201ENST00000603444 466 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC107952.2-201ENST00000606048 486 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 MIR6768-201ENST00000610734 72 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AP002791.1-201ENST00000623291 381 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC097063.1-201ENST00000426714 1797 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AL353743.4-201ENST00000422653 1547 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 MIR323B-201ENST00000385269 82 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 RN7SKP199-201ENST00000410325 305 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 Z93019.1-201ENST00000416450 973 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 PPIAP17-201ENST00000438507 471 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 MTCYBP31-201ENST00000438855 1122 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 HMGB1P16-201ENST00000447155 540 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AC233982.1-201ENST00000451247 436 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AZGP1P2-201ENST00000454506 345 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 MTCO2P6-201ENST00000463134 685 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AC021660.1-201ENST00000465006 554 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 RN7SL51P-201ENST00000468230 285 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AC090114.3-201ENST00000479267 829 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 GAPDHP39-201ENST00000481866 979 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AC040958.1-201ENST00000561102 201 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AC090695.1-201ENST00000561269 1222 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AC079395.2-201ENST00000610982 737 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 BNIP3P41-202ENST00000616656 861 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 MIR6886-201ENST00000619864 61 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 MIR8080-201ENST00000622224 89 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AC091932.2-201ENST00000623014 291 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 Z95331.1-201ENST00000623075 23112 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 MTCO1P11-201ENST00000429111 1528 ntBASIC5.17□□□□□ -1.58
NECTIN3Q9NQS3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
NECTIN3Q9NQS3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.16□□□□□ -1.58
NECTIN3Q9NQS3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
NECTIN3Q9NQS3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NECTIN3Q9NQS3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
NECTIN3Q9NQS3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
NECTIN3Q9NQS3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
NECTIN3Q9NQS3 AC134882.1-201ENST00000603738 1676 ntBASIC5.16□□□□□ -1.58
NECTIN3Q9NQS3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NECTIN3Q9NQS3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NECTIN3Q9NQS3 HMGB1P5-201ENST00000255320 642 ntBASIC5.16□□□□□ -1.58
NECTIN3Q9NQS3 RN7SKP160-201ENST00000363804 340 ntBASIC5.16□□□□□ -1.58
NECTIN3Q9NQS3 RNU6-707P-201ENST00000364647 95 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms