Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 HMGB1P36-201ENST00000487709 576 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 IGBP1P5-201ENST00000507524 1000 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC097486.1-201ENST00000515331 210 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 RNU6-718P-201ENST00000516166 105 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC025260.1-201ENST00000548858 430 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 VN1R92P-201ENST00000598511 928 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AP001437.1-201ENST00000608783 456 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC005962.2-201ENST00000611427 652 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC090970.3-201ENST00000612566 866 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 RNA5SP439-201ENST00000617595 124 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AL592429.1-201ENST00000403909 1473 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXP3Q9BZS1 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 AC097063.1-201ENST00000426714 1797 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 AC024587.1-201ENST00000505925 2157 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 AC093225.1-201ENST00000506867 1408 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 AL137141.1-201ENST00000624622 4836 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 RN7SKP78-201ENST00000364711 318 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 MIR525-201ENST00000384978 85 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 RNA5SP105-201ENST00000391123 113 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 RN7SKP108-201ENST00000411367 328 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 AL590806.1-201ENST00000415818 853 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 HIGD1AP16-201ENST00000450986 258 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 ACA64.4-201ENST00000459070 127 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 OR9M1P-201ENST00000459641 921 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 RPS4XP12-201ENST00000461747 709 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 TMED11P-201ENST00000479478 690 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 AC093281.2-201ENST00000510153 597 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 OR8Q1P-201ENST00000526467 655 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 AL121594.2-201ENST00000541658 472 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 CYCSP38-201ENST00000559840 322 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 ZNF322P1-201ENST00000568013 1209 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 FAM106CP-201ENST00000582212 507 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 AC015871.2-201ENST00000603605 948 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 AL159169.3-201ENST00000608871 561 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 TUG1_1.1-201ENST00000610654 145 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 SNX18P12-201ENST00000624821 759 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 LINC01739-205ENST00000641890 573 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 AC079776.5-201ENST00000641920 211 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 AC015689.2-201ENST00000528172 1738 ntBASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
FOXP3Q9BZS1 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 AC027575.3-201ENST00000583058 2747 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 MTCO1P7-201ENST00000419523 1542 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms