Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
UPF3BQ9BZI7 AC120338.1-201ENST00000625074 1541 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 AC067945.1-201ENST00000342609 618 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 RNA5SP22-201ENST00000365393 109 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 RNU1-64P-201ENST00000365443 163 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 RPS20P14-201ENST00000412545 360 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 PDSS1P1-201ENST00000422953 1114 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 AL158073.1-201ENST00000426848 1104 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 RPL12P28-201ENST00000430852 489 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 UBE2V1P3-201ENST00000439651 417 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 RPL21P6-201ENST00000479171 504 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 RN7SL690P-201ENST00000582087 240 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 AC010857.1-201ENST00000606398 594 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 AC005962.2-201ENST00000611427 652 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 AL121890.2-201ENST00000617644 465 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 AC008785.1-201ENST00000624475 456 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 LINC01808-202ENST00000641680 1116 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 OR52H1-202ENST00000641796 1061 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 OR51C1P-202ENST00000641159 1444 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 ASNSP1-204ENST00000641977 1664 ntBASIC5.28□□□□□ -1.56
UPF3BQ9BZI7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 AC139713.2-214ENST00000642059 1811 ntBASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 IGKV7-3-201ENST00000357453 298 ntBASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 RNA5SP307-201ENST00000362863 116 ntBASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 AL078604.1-201ENST00000404609 466 ntBASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 RNA5SP146-201ENST00000410743 123 ntBASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 Z95152.1-201ENST00000453556 656 ntBASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 AC008694.2-201ENST00000517591 306 ntBASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 GLRXP2-201ENST00000555594 321 ntBASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 AC008759.1-201ENST00000589783 983 ntBASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 AL138721.1-201ENST00000616756 179 ntBASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 AL161637.1-201ENST00000622380 412 ntBASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPF3BQ9BZI7 OR51H2P-202ENST00000641424 3046 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 MAPK10-286ENST00000641208 8747 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 SNORA70F-201ENST00000384142 135 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 U3.22-201ENST00000391120 215 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 VN1R8P-201ENST00000407739 893 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 AL139095.3-201ENST00000419672 1203 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 RPL7AP25-201ENST00000423357 805 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 SKP1P3-201ENST00000429280 487 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 TMX2P1-201ENST00000436507 708 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 MTND2P28-201ENST00000457540 1044 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 AC022034.3-201ENST00000471393 478 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 NIP7P2-201ENST00000485801 544 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 HMGB1P19-201ENST00000517578 577 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 AC138701.1-201ENST00000524329 714 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 AC084824.1-201ENST00000550917 1005 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 AC007224.1-201ENST00000564410 144 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 AC007066.2-202ENST00000566531 914 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 RPL23AP97-201ENST00000568955 471 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 AC005034.4-201ENST00000603612 899 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 AL596275.2-204ENST00000641628 552 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 AL596275.2-206ENST00000641957 626 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 AL592182.3-201ENST00000642132 3304 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 AC000123.3-201ENST00000624029 4975 ntBASIC5.26□□□□□ -1.57
UPF3BQ9BZI7 AC104118.1-201ENST00000607625 1589 ntBASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 AP000756.2-201ENST00000624168 2567 ntBASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms