Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 EEF1B2P1-201ENST00000567221 672 ntBASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 AC005518.2-201ENST00000603254 282 ntBASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 AC107871.2-201ENST00000612894 502 ntBASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 AC083806.3-201ENST00000614016 455 ntBASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 AL122023.1-201ENST00000622847 530 ntBASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 AL049541.2-201ENST00000626377 555 ntBASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 AC063952.1-203ENST00000634410 658 ntBASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 DBF4P1-201ENST00000412976 1892 ntBASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.74□□□□□ -1.33
CNTNAP3Q9BZ76 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 AC012618.3-205ENST00000637896 1496 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 MAPK10-319ENST00000641459 2542 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 RNU4-7P-201ENST00000364758 141 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 RNU6-1032P-201ENST00000384100 107 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 MIR105-2-201ENST00000385083 81 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 RNU6-1158P-201ENST00000391167 107 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 OR2AT2P-201ENST00000413438 905 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 MTATP6P18-201ENST00000417994 673 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 AL451054.2-201ENST00000420896 202 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 USP24P1-201ENST00000433802 779 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 DNAJC19P5-201ENST00000443295 316 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 Y_RNA.635-201ENST00000459041 101 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 RN7SL254P-201ENST00000460609 284 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 RN7SL332P-201ENST00000482163 254 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 RNA5SP135-201ENST00000517019 125 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 IGLC4-201ENST00000517690 248 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 TRIM77BP-201ENST00000524985 1119 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 AC092718.4-201ENST00000566639 716 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 SS18L2P2-201ENST00000583960 235 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 GLYATL1P2-202ENST00000588046 902 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 AC011447.2-201ENST00000592921 283 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 SNX29P2-204ENST00000603801 875 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 APOOP1-201ENST00000604695 592 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 AL008723.3-201ENST00000608926 449 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 MKKS-204ENST00000639674 192 ntBASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.73□□□□□ -1.33
CNTNAP3Q9BZ76 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms