Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM55Q9BYV6 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 RNU1-146P-201ENST00000364015 165 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 RNU6-657P-201ENST00000383904 107 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 MTCO3P41-201ENST00000414801 328 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 LINC00993-201ENST00000420453 540 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 MTCO2P34-201ENST00000421994 607 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 OSTCP4-201ENST00000424397 449 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 NIPA2P1-201ENST00000426223 976 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC124944.2-201ENST00000429866 1242 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 TRIM60P18-201ENST00000441518 828 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 RNU6-956P-201ENST00000458868 103 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC094085.1-201ENST00000468914 584 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC090602.1-201ENST00000469695 252 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 RAD51AP1P1-201ENST00000484195 1001 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC011411.1-201ENST00000509592 876 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 MTCYBP43-201ENST00000513621 740 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 RNU6-583P-201ENST00000516012 92 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 RNU2-30P-201ENST00000516209 141 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 snoU109.5-201ENST00000516231 132 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC239860.2-201ENST00000525886 270 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AL133399.1-201ENST00000527476 298 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AP000790.1-201ENST00000528891 737 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC022146.1-201ENST00000595307 847 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AL596327.1-201ENST00000603629 213 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC128687.1-201ENST00000605304 619 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AL365181.4-201ENST00000609800 547 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 RNA5SP439-201ENST00000617595 124 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 MIR6729-201ENST00000618194 65 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC006927.3-201ENST00000638789 384 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC011933.2-201ENST00000578539 2790 ntBASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM55Q9BYV6 AC107081.3-201ENST00000612715 2034 ntBASIC6.09□□□□□ -1.43
TRIM55Q9BYV6 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM55Q9BYV6 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM55Q9BYV6 AC104966.1-201ENST00000467010 1464 ntBASIC6.09□□□□□ -1.43
TRIM55Q9BYV6 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
TRIM55Q9BYV6 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM55Q9BYV6 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM55Q9BYV6 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM55Q9BYV6 SNRPEP3-201ENST00000338402 276 ntBASIC6.09□□□□□ -1.43
TRIM55Q9BYV6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM55Q9BYV6 RNA5SP453-201ENST00000362503 119 ntBASIC6.09□□□□□ -1.43
TRIM55Q9BYV6 RNA5SP88-201ENST00000365560 109 ntBASIC6.09□□□□□ -1.43
TRIM55Q9BYV6 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM55Q9BYV6 RNU2-28P-201ENST00000410457 189 ntBASIC6.09□□□□□ -1.43
TRIM55Q9BYV6 PGBD4P8-201ENST00000412993 562 ntBASIC6.09□□□□□ -1.43
TRIM55Q9BYV6 OFD1P11Y-201ENST00000418213 1177 ntBASIC6.09□□□□□ -1.43
TRIM55Q9BYV6 IPPKP1-201ENST00000422501 768 ntBASIC6.09□□□□□ -1.43
TRIM55Q9BYV6 CENPIP1-201ENST00000425713 902 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms