Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC018555.1-201ENST00000567548 1980 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 RN7SKP162-201ENST00000363605 345 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 AC009302.1-201ENST00000417147 390 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 RPL24P2-201ENST00000421023 475 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 RPL23AP25-201ENST00000430973 463 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 RPL10P17-201ENST00000453852 316 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 RPS5P7-201ENST00000456664 608 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 AC090114.3-201ENST00000479267 829 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 AC140172.1-201ENST00000502928 141 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 PCNAP1-201ENST00000505363 709 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 MTND3P24-201ENST00000506306 329 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 PGBD4P4-201ENST00000509673 613 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 RNA5SP497-201ENST00000516081 97 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 UBTFL9-201ENST00000534504 1148 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 OR7A19P-201ENST00000608051 733 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 AL031666.3-201ENST00000609320 1006 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 AC233309.1-201ENST00000619522 751 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 NCLP2-201ENST00000416078 1462 ntBASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC28BQ9BUN5 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AL442639.1-201ENST00000625030 1899 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 RNA5SP242-201ENST00000364171 118 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 RNU1-44P-201ENST00000384453 163 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 ST13P16-201ENST00000401760 781 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 ZNF603P-201ENST00000405613 487 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 FCF1P5-201ENST00000406490 482 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 MIR1286-201ENST00000408112 78 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AL591848.1-201ENST00000413092 322 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 CENPIP1-201ENST00000425713 902 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 RPL7P4-203ENST00000430239 730 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 MTND4LP7-201ENST00000431728 294 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 HMGB3P10-201ENST00000434734 572 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AP000949.1-201ENST00000438328 629 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 SDR42E1P3-201ENST00000438345 502 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AL691517.1-201ENST00000440833 1235 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AL935212.3-201ENST00000450729 284 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AL162388.1-201ENST00000450912 352 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 ISCUP1-201ENST00000454451 448 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AL133477.1-201ENST00000457472 514 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AC072052.1-201ENST00000496556 306 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AC083829.1-201ENST00000503756 657 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AC098799.3-201ENST00000506095 438 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 IGKV2-18-201ENST00000522607 343 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 OR4V1P-201ENST00000525394 1140 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AL360157.1-201ENST00000565962 87 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 OR1F2P-201ENST00000570470 933 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 MTND2P13-201ENST00000577438 1039 ntBASIC4.47□□□□□ -1.69
CCDC28BQ9BUN5 AC090312.1-201ENST00000580637 348 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms