Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.04□□□□□ -1.28
IFT140Q96RY7 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC7.04□□□□□ -1.28
IFT140Q96RY7 AL451050.1-201ENST00000450126 415 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 DDX39BP2-208ENST00000453923 258 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 RNU6-352P-201ENST00000516908 107 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC7.04□□□□□ -1.28
IFT140Q96RY7 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC7.04□□□□□ -1.28
IFT140Q96RY7 AC027455.1-201ENST00000574104 594 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 AC022655.2-201ENST00000577280 318 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC7.04□□□□□ -1.28
IFT140Q96RY7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.04□□□□□ -1.28
IFT140Q96RY7 AL034408.1-202ENST00000636088 415 ntBASIC7.04□□□□□ -1.28
IFT140Q96RY7 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
IFT140Q96RY7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
IFT140Q96RY7 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
IFT140Q96RY7 NXPH1-205ENST00000602349 1953 ntBASIC7.03□□□□□ -1.28
IFT140Q96RY7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
IFT140Q96RY7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
IFT140Q96RY7 AC058791.1-201ENST00000608412 3198 ntBASIC7.03□□□□□ -1.28
IFT140Q96RY7 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
IFT140Q96RY7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
IFT140Q96RY7 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.03□□□□□ -1.28
IFT140Q96RY7 AC090686.1-201ENST00000481577 749 ntBASIC7.03□□□□□ -1.28
IFT140Q96RY7 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.03□□□□□ -1.28
IFT140Q96RY7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC7.03□□□□□ -1.28
IFT140Q96RY7 AC037471.2-201ENST00000564941 598 ntBASIC7.03□□□□□ -1.28
IFT140Q96RY7 AC010201.1-201ENST00000605051 540 ntBASIC7.03□□□□□ -1.28
IFT140Q96RY7 AC116667.1-201ENST00000604855 2072 ntBASIC7.03□□□□□ -1.28
IFT140Q96RY7 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC7.02□□□□□ -1.28
IFT140Q96RY7 CCAT2-201ENST00000630920 1752 ntBASIC7.02□□□□□ -1.29
IFT140Q96RY7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC7.02□□□□□ -1.29
IFT140Q96RY7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
IFT140Q96RY7 AC104333.2-201ENST00000422630 192 ntBASIC7.02□□□□□ -1.29
IFT140Q96RY7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC7.02□□□□□ -1.29
IFT140Q96RY7 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC7.02□□□□□ -1.29
IFT140Q96RY7 RPL38P1-201ENST00000460914 211 ntBASIC7.02□□□□□ -1.29
IFT140Q96RY7 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC7.02□□□□□ -1.29
IFT140Q96RY7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC7.02□□□□□ -1.29
IFT140Q96RY7 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC7.02□□□□□ -1.29
IFT140Q96RY7 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC7.02□□□□□ -1.29
IFT140Q96RY7 RPL23AP97-201ENST00000568955 471 ntBASIC7.02□□□□□ -1.29
IFT140Q96RY7 MIR5195-201ENST00000583555 115 ntBASIC7.02□□□□□ -1.29
IFT140Q96RY7 AC091178.1-203ENST00000584586 279 ntBASIC7.02□□□□□ -1.29
IFT140Q96RY7 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
IFT140Q96RY7 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC7.02□□□□□ -1.29
IFT140Q96RY7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
IFT140Q96RY7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
IFT140Q96RY7 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
IFT140Q96RY7 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
IFT140Q96RY7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
IFT140Q96RY7 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC7.01□□□□□ -1.29
IFT140Q96RY7 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.01□□□□□ -1.29
IFT140Q96RY7 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
IFT140Q96RY7 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
IFT140Q96RY7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
IFT140Q96RY7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
IFT140Q96RY7 TBCAP1-201ENST00000436520 327 ntBASIC7.01□□□□□ -1.29
IFT140Q96RY7 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC7.01□□□□□ -1.29
IFT140Q96RY7 VN1R32P-201ENST00000452234 905 ntBASIC7.01□□□□□ -1.29
IFT140Q96RY7 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC7.01□□□□□ -1.29
IFT140Q96RY7 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC7.01□□□□□ -1.29
IFT140Q96RY7 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC7.01□□□□□ -1.29
IFT140Q96RY7 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC7.01□□□□□ -1.29
IFT140Q96RY7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC7.01□□□□□ -1.29
IFT140Q96RY7 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
IFT140Q96RY7 FP236240.3-201ENST00000623061 327 ntBASIC7.01□□□□□ -1.29
IFT140Q96RY7 AC007546.2-201ENST00000623996 360 ntBASIC7.01□□□□□ -1.29
IFT140Q96RY7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
IFT140Q96RY7 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.01□□□□□ -1.29
IFT140Q96RY7 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC7.01□□□□□ -1.29
IFT140Q96RY7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
IFT140Q96RY7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC7.01□□□□□ -1.29
IFT140Q96RY7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
IFT140Q96RY7 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
IFT140Q96RY7 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7□□□□□ -1.29
IFT140Q96RY7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
IFT140Q96RY7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC7□□□□□ -1.29
IFT140Q96RY7 HSPE1P12-201ENST00000412576 301 ntBASIC7□□□□□ -1.29
IFT140Q96RY7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC7□□□□□ -1.29
IFT140Q96RY7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC7□□□□□ -1.29
IFT140Q96RY7 MRPL48P1-201ENST00000445390 636 ntBASIC7□□□□□ -1.29
IFT140Q96RY7 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7□□□□□ -1.29
IFT140Q96RY7 AC007991.1-201ENST00000522680 631 ntBASIC7□□□□□ -1.29
IFT140Q96RY7 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC7□□□□□ -1.29
IFT140Q96RY7 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC7□□□□□ -1.29
IFT140Q96RY7 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
IFT140Q96RY7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
IFT140Q96RY7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC7□□□□□ -1.29
IFT140Q96RY7 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
IFT140Q96RY7 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
IFT140Q96RY7 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7□□□□□ -1.29
IFT140Q96RY7 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7□□□□□ -1.29
IFT140Q96RY7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC7□□□□□ -1.29
IFT140Q96RY7 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7□□□□□ -1.29
IFT140Q96RY7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC7□□□□□ -1.29
IFT140Q96RY7 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
IFT140Q96RY7 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
IFT140Q96RY7 RPL7P58-201ENST00000402913 758 ntBASIC6.99□□□□□ -1.29
IFT140Q96RY7 CEACAMP1-201ENST00000434624 1035 ntBASIC6.99□□□□□ -1.29
IFT140Q96RY7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms