Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.26□□□□□ -1.57
VPS50Q96JG6 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
VPS50Q96JG6 CASC19-221ENST00000641309 1382 ntBASIC5.26□□□□□ -1.57
VPS50Q96JG6 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS50Q96JG6 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS50Q96JG6 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS50Q96JG6 MRE11P1-201ENST00000464884 2127 ntBASIC5.26□□□□□ -1.57
VPS50Q96JG6 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS50Q96JG6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS50Q96JG6 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.26□□□□□ -1.57
VPS50Q96JG6 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS50Q96JG6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS50Q96JG6 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VPS50Q96JG6 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS50Q96JG6 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS50Q96JG6 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS50Q96JG6 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS50Q96JG6 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 RNU6-666P-201ENST00000363499 107 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 SNORD116-2-201ENST00000384274 95 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 RNU6-185P-201ENST00000384421 107 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 SNORD116-6-201ENST00000384711 96 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 MIR105-2-201ENST00000385083 81 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 RNA5SP241-201ENST00000391326 114 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 RN7SKP247-201ENST00000411094 308 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC012519.1-201ENST00000424588 610 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 BRWD1P3-201ENST00000428816 390 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 MTND5P25-201ENST00000430499 799 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 AL627308.1-201ENST00000435693 821 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC006335.2-201ENST00000437993 330 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC092170.1-201ENST00000440211 356 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 AL353093.1-201ENST00000441292 436 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 MTCYBP42-201ENST00000444653 1130 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 ARL5AP2-201ENST00000444698 533 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 CASP3P1-201ENST00000446037 609 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 IGBP1P3-201ENST00000447449 1000 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC021205.1-201ENST00000468797 348 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 RN7SL184P-201ENST00000488308 297 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC090638.1-201ENST00000498296 909 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC008638.1-201ENST00000506035 866 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 snoU109.6-201ENST00000516831 118 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 AP006245.2-201ENST00000522004 300 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC025260.1-201ENST00000548858 430 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 CYP2C60P-201ENST00000566088 139 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 ATP5F1P7-201ENST00000567330 760 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC008088.1-201ENST00000580993 280 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC012616.1-201ENST00000600294 197 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC021171.1-201ENST00000603137 706 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 SDR42E1P1-201ENST00000611327 477 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 U6.48-201ENST00000618523 106 ntBASIC5.25□□□□□ -1.57
VPS50Q96JG6 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS50Q96JG6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS50Q96JG6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS50Q96JG6 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
VPS50Q96JG6 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 AC005332.5-201ENST00000591222 2919 ntBASIC5.24□□□□□ -1.57
VPS50Q96JG6 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS50Q96JG6 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS50Q96JG6 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS50Q96JG6 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms