Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RPS5P7-201ENST00000456664 608 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AC004815.1-201ENST00000484185 331 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 SNORD116-26-201ENST00000516006 96 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AC103833.1-201ENST00000517442 172 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 LINC00557-201ENST00000563184 1279 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AC093249.4-201ENST00000564755 259 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AC011487.3-201ENST00000593607 453 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AC079610.2-201ENST00000604818 690 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 RPL21P136-201ENST00000605378 396 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AC011815.3-201ENST00000624194 473 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 RNA5SP507-201ENST00000363603 121 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 U3.30-201ENST00000391308 210 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AL590762.2-201ENST00000395798 571 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 MIR1178-201ENST00000408396 91 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AC010385.1-201ENST00000412374 256 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AL627308.1-201ENST00000435693 821 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AC112498.1-201ENST00000444401 332 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AC234781.3-201ENST00000452540 973 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 OR2AF1P-201ENST00000454899 889 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 RPL37P3-201ENST00000456825 293 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 RPS20P4-201ENST00000461659 355 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 ARL4AP1-201ENST00000503220 705 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 RNU1-6P-201ENST00000516290 144 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AC022790.1-201ENST00000522872 204 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 MORF4L1P3-201ENST00000525966 950 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 OR5AZ1P-201ENST00000527448 943 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AC090079.2-201ENST00000575289 768 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 RN7SL753P-201ENST00000581238 290 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AC092474.3-201ENST00000603022 568 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AC135178.6-201ENST00000605314 398 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 MAPK10-349ENST00000641767 3661 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 SALL4P2-201ENST00000423288 2910 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 NCLP2-201ENST00000416078 1462 ntBASIC4.69□□□□□ -1.66
PDLIM5Q96HC4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PDLIM5Q96HC4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms