Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.2□□□□□ -1.58
HMGB4Q8WW32 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 COX6B1P5-201ENST00000509843 249 ntBASIC5.2□□□□□ -1.58
HMGB4Q8WW32 RN7SKP287-201ENST00000516546 266 ntBASIC5.2□□□□□ -1.58
HMGB4Q8WW32 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 OR7E128P-201ENST00000532736 1024 ntBASIC5.2□□□□□ -1.58
HMGB4Q8WW32 OR4A43P-201ENST00000532938 908 ntBASIC5.2□□□□□ -1.58
HMGB4Q8WW32 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 MFSD8-220ENST00000641243 1422 ntBASIC5.2□□□□□ -1.58
HMGB4Q8WW32 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 AC111188.2-201ENST00000529697 1387 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 RNU4-51P-201ENST00000364206 140 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 RNA5SP428-201ENST00000365129 132 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 RNU6-224P-201ENST00000384055 107 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 SNORA66-201ENST00000384792 133 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 MIR192-201ENST00000384915 110 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 RN7SKP97-201ENST00000410966 333 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 AC245028.1-201ENST00000423259 256 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 XKRYP1-201ENST00000423438 492 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 HSPD1P12-201ENST00000429127 1069 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 XKRYP2-201ENST00000432915 492 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 AC009263.1-201ENST00000441193 1239 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 CASP3P1-201ENST00000446037 609 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 KNOP1P3-201ENST00000446933 426 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 AC022431.1-201ENST00000450941 438 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 TRBV8-2-201ENST00000475637 270 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 CR383656.1-201ENST00000484916 377 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 AC091860.1-201ENST00000505723 432 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 MTCO1P40-201ENST00000574371 625 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 MIR4270-201ENST00000581799 70 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 AC008814.1-201ENST00000603797 406 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 AL162431.4-201ENST00000604674 411 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 MEMO1P5-201ENST00000604810 406 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 AL161616.1-201ENST00000611867 286 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 AC010975.3-201ENST00000618727 978 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 AL121895.2-201ENST00000619558 447 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 AC099786.3-201ENST00000565735 1410 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 ABCC13-202ENST00000463099 3842 ntBASIC5.19□□□□□ -1.58
HMGB4Q8WW32 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HMGB4Q8WW32 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HMGB4Q8WW32 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms