Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 AP000432.2-201ENST00000624164 2048 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNED1Q8TER0 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 RPS26P4-201ENST00000431743 355 ntBASIC5.31□□□□□ -1.56
SNED1Q8TER0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNED1Q8TER0 MTND2P39-201ENST00000457230 764 ntBASIC5.31□□□□□ -1.56
SNED1Q8TER0 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 SUMO2P4-201ENST00000504193 276 ntBASIC5.31□□□□□ -1.56
SNED1Q8TER0 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 AL451086.1-201ENST00000605596 223 ntBASIC5.31□□□□□ -1.56
SNED1Q8TER0 RNU4-89P-201ENST00000607443 133 ntBASIC5.31□□□□□ -1.56
SNED1Q8TER0 AC004777.1-201ENST00000624317 287 ntBASIC5.31□□□□□ -1.56
SNED1Q8TER0 AC080188.3-201ENST00000624842 748 ntBASIC5.31□□□□□ -1.56
SNED1Q8TER0 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNED1Q8TER0 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNED1Q8TER0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNED1Q8TER0 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 AL442128.2-201ENST00000620246 1824 ntBASIC5.31□□□□□ -1.56
SNED1Q8TER0 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNED1Q8TER0 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNED1Q8TER0 SNORA11C-201ENST00000408532 129 ntBASIC5.31□□□□□ -1.56
SNED1Q8TER0 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNED1Q8TER0 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 AL133547.1-201ENST00000448546 220 ntBASIC5.31□□□□□ -1.56
SNED1Q8TER0 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNED1Q8TER0 SNRPCP3-201ENST00000474888 476 ntBASIC5.31□□□□□ -1.56
SNED1Q8TER0 AC069304.1-201ENST00000491593 704 ntBASIC5.31□□□□□ -1.56
SNED1Q8TER0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 RNA5SP360-201ENST00000516555 118 ntBASIC5.31□□□□□ -1.56
SNED1Q8TER0 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNED1Q8TER0 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.31□□□□□ -1.56
SNED1Q8TER0 IMMP1LP1-201ENST00000605170 488 ntBASIC5.31□□□□□ -1.56
SNED1Q8TER0 AC100814.1-201ENST00000606963 623 ntBASIC5.31□□□□□ -1.56
SNED1Q8TER0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNED1Q8TER0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNED1Q8TER0 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SNED1Q8TER0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.3□□□□□ -1.56
SNED1Q8TER0 AL355852.1-201ENST00000454081 1771 ntBASIC5.3□□□□□ -1.56
SNED1Q8TER0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SNED1Q8TER0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SNED1Q8TER0 THAP12P5-201ENST00000405864 2275 ntBASIC5.3□□□□□ -1.56
SNED1Q8TER0 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SNED1Q8TER0 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SNED1Q8TER0 MAPK10-349ENST00000641767 3661 ntBASIC5.3□□□□□ -1.56
SNED1Q8TER0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SNED1Q8TER0 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
SNED1Q8TER0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SNED1Q8TER0 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.3□□□□□ -1.56
SNED1Q8TER0 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.3□□□□□ -1.56
SNED1Q8TER0 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SNED1Q8TER0 HMGN2P27-201ENST00000427352 270 ntBASIC5.3□□□□□ -1.56
SNED1Q8TER0 AC007389.2-201ENST00000434630 306 ntBASIC5.3□□□□□ -1.56
SNED1Q8TER0 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.3□□□□□ -1.56
SNED1Q8TER0 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SNED1Q8TER0 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.3□□□□□ -1.56
SNED1Q8TER0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.3□□□□□ -1.56
SNED1Q8TER0 OR5BC1P-201ENST00000529327 739 ntBASIC5.3□□□□□ -1.56
SNED1Q8TER0 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.3□□□□□ -1.56
SNED1Q8TER0 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.3□□□□□ -1.56
SNED1Q8TER0 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.3□□□□□ -1.56
SNED1Q8TER0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.3□□□□□ -1.56
SNED1Q8TER0 AC024220.1-201ENST00000603675 484 ntBASIC5.3□□□□□ -1.56
SNED1Q8TER0 AC015849.6-201ENST00000605454 474 ntBASIC5.3□□□□□ -1.56
SNED1Q8TER0 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.3□□□□□ -1.56
SNED1Q8TER0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.3□□□□□ -1.56
SNED1Q8TER0 AC008013.2-202ENST00000637965 364 ntBASIC5.3□□□□□ -1.56
SNED1Q8TER0 DDX18P6-201ENST00000450119 1997 ntBASIC5.3□□□□□ -1.56
SNED1Q8TER0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SNED1Q8TER0 AC093909.5-201ENST00000621839 1799 ntBASIC5.3□□□□□ -1.56
SNED1Q8TER0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SNED1Q8TER0 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNED1Q8TER0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SNED1Q8TER0 TCP11X1-202ENST00000622971 1372 ntBASIC5.29□□□□□ -1.56
SNED1Q8TER0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNED1Q8TER0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SNED1Q8TER0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SNED1Q8TER0 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SNED1Q8TER0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms