Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 uc_338.32-201ENST00000615087 172 ntBASIC3.32□□□□□ -1.88
NUP35Q8NFH5 AC019278.1-201ENST00000623516 479 ntBASIC3.32□□□□□ -1.88
NUP35Q8NFH5 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NUP35Q8NFH5 NCLP2-201ENST00000416078 1462 ntBASIC3.32□□□□□ -1.88
NUP35Q8NFH5 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NUP35Q8NFH5 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.32□□□□□ -1.88
NUP35Q8NFH5 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AC017007.4-201ENST00000503353 1352 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AP002530.1-201ENST00000405705 684 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 SNORA81-201ENST00000408493 178 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 MIR1911-201ENST00000410783 80 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 CYCSP11-201ENST00000436426 315 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 MTND2P25-201ENST00000449028 610 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AC108463.1-201ENST00000450258 347 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 HMGB3P21-201ENST00000452483 547 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 RPS5P7-201ENST00000456664 608 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 RPL21P71-201ENST00000465598 459 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AC096741.1-201ENST00000472250 846 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 RN7SL174P-201ENST00000475578 289 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AC092045.1-201ENST00000495716 1231 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AP006289.1-201ENST00000538089 277 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AL360157.1-201ENST00000565962 87 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 MIR4458-201ENST00000578872 75 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AC020914.4-201ENST00000597690 277 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AC005034.4-201ENST00000603612 899 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AL391358.1-201ENST00000605342 190 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AC008785.1-201ENST00000624475 456 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUP35Q8NFH5 AL133412.1-201ENST00000380194 2992 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 RN7SKP162-201ENST00000363605 345 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 SNORA62.2-201ENST00000364672 152 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 RN7SKP269-201ENST00000365545 319 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 U3.25-201ENST00000391209 220 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 RPL35AP24-201ENST00000413846 330 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 AC234779.1-201ENST00000425910 285 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 RPEP2-201ENST00000432149 701 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 OR52B5P-201ENST00000435337 951 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 AC097523.2-201ENST00000435551 652 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 RPL12P11-201ENST00000439970 501 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 HMGB1P16-201ENST00000447155 540 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 EIF2S2P4-201ENST00000461070 984 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 RPS4XP1-201ENST00000482189 787 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 IGLV2-34-201ENST00000490007 283 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 AC106872.2-201ENST00000494303 480 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 AC024558.1-201ENST00000505008 528 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 FTH1P9-201ENST00000513251 355 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 IGLVIV-64-201ENST00000518581 301 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 IGKV2-18-201ENST00000522607 343 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 AL352979.3-201ENST00000553515 247 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.3□□□□□ -1.88
NUP35Q8NFH5 VN1R79P-201ENST00000593540 513 ntBASIC3.3□□□□□ -1.88
NUP35Q8NFH5 HMGB1P50-201ENST00000605814 607 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms