Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AL445687.2-201ENST00000458156 728 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 RN7SL352P-201ENST00000466002 277 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AC114728.1-201ENST00000488289 483 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AC111193.1-201ENST00000504097 155 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AC008945.1-201ENST00000505144 499 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 RN7SKP183-201ENST00000517169 324 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AC239860.2-201ENST00000525886 270 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 OR4A45P-201ENST00000529954 901 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 OR8L1P-201ENST00000534005 955 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AL161729.4-201ENST00000604650 476 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 RPSAP75-201ENST00000605848 301 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AC087045.1-201ENST00000605856 382 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AC141002.1-201ENST00000607025 279 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AL354760.1-201ENST00000608357 643 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AC079228.1-201ENST00000624774 1049 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AL359697.1-201ENST00000624879 587 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 CRYM-AS1-204ENST00000637983 556 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AC010325.3-201ENST00000641084 394 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AC131971.1-201ENST00000332881 1482 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 AL034370.1-201ENST00000397254 1590 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.75□□□□□ -1.49
NUP43Q8NFH3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.75□□□□□ -1.49
NUP43Q8NFH3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 AC005225.5-201ENST00000623547 2225 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 RNA5SP375-201ENST00000362975 119 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 RNU6-116P-201ENST00000384042 109 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 AL121835.1-201ENST00000404250 354 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 VDAC1P6-201ENST00000430062 855 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 AL831737.1-201ENST00000441288 271 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 RPL31P44-201ENST00000447680 377 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 DNAJB5P1-201ENST00000454004 806 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 RN7SL552P-201ENST00000462094 276 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 AC010307.1-201ENST00000467206 836 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 AC098818.1-201ENST00000478593 252 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 MTCO2P30-201ENST00000503662 364 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 DUTP7-201ENST00000507982 486 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 AC108078.1-201ENST00000508073 725 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 HMGN1P16-201ENST00000508308 283 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 AC090958.1-201ENST00000511122 351 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 RNA5SP135-201ENST00000517019 125 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.74□□□□□ -1.49
NUP43Q8NFH3 OR5M7P-201ENST00000526140 972 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 AP001189.2-201ENST00000527320 189 ntBASIC5.74□□□□□ -1.49
NUP43Q8NFH3 OR5AQ1P-201ENST00000527596 927 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms