Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.39□□□□□ -1.55
RTL9Q8NET4 AC097505.1-201ENST00000610199 565 ntBASIC5.39□□□□□ -1.55
RTL9Q8NET4 MIR6867-201ENST00000610636 67 ntBASIC5.39□□□□□ -1.55
RTL9Q8NET4 AC006133.1-201ENST00000617106 264 ntBASIC5.39□□□□□ -1.55
RTL9Q8NET4 AC091905.2-201ENST00000623143 306 ntBASIC5.39□□□□□ -1.55
RTL9Q8NET4 AC099654.11-201ENST00000638857 294 ntBASIC5.39□□□□□ -1.55
RTL9Q8NET4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 AL133268.1-201ENST00000405676 1401 ntBASIC5.38□□□□□ -1.55
RTL9Q8NET4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTL9Q8NET4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTL9Q8NET4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTL9Q8NET4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTL9Q8NET4 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTL9Q8NET4 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTL9Q8NET4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTL9Q8NET4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTL9Q8NET4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 NACAP7-201ENST00000407371 609 ntBASIC5.38□□□□□ -1.55
RTL9Q8NET4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 RN7SKP33-201ENST00000410942 340 ntBASIC5.38□□□□□ -1.55
RTL9Q8NET4 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.38□□□□□ -1.55
RTL9Q8NET4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 OR13Z1P-201ENST00000416141 834 ntBASIC5.38□□□□□ -1.55
RTL9Q8NET4 RPEP2-201ENST00000432149 701 ntBASIC5.38□□□□□ -1.55
RTL9Q8NET4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 ATP1B1P1-201ENST00000509767 915 ntBASIC5.38□□□□□ -1.55
RTL9Q8NET4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTL9Q8NET4 AC108064.1-201ENST00000513791 460 ntBASIC5.38□□□□□ -1.55
RTL9Q8NET4 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 MIR3936-201ENST00000584304 110 ntBASIC5.38□□□□□ -1.55
RTL9Q8NET4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 AL021997.2-201ENST00000615674 271 ntBASIC5.38□□□□□ -1.55
RTL9Q8NET4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTL9Q8NET4 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.38□□□□□ -1.55
RTL9Q8NET4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTL9Q8NET4 AC007546.2-201ENST00000623996 360 ntBASIC5.38□□□□□ -1.55
RTL9Q8NET4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTL9Q8NET4 AL133243.3-201ENST00000617415 3004 ntBASIC5.38□□□□□ -1.55
RTL9Q8NET4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RTL9Q8NET4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RTL9Q8NET4 CYP1D1P-201ENST00000416662 1433 ntBASIC5.38□□□□□ -1.55
RTL9Q8NET4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.38□□□□□ -1.55
RTL9Q8NET4 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.37□□□□□ -1.55
RTL9Q8NET4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTL9Q8NET4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RTL9Q8NET4 AC097461.1-201ENST00000568928 2821 ntBASIC5.37□□□□□ -1.55
RTL9Q8NET4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTL9Q8NET4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTL9Q8NET4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTL9Q8NET4 AC099654.3-201ENST00000447087 1546 ntBASIC5.37□□□□□ -1.55
RTL9Q8NET4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RTL9Q8NET4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.37□□□□□ -1.55
RTL9Q8NET4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.37□□□□□ -1.55
RTL9Q8NET4 AL035696.2-201ENST00000407941 709 ntBASIC5.37□□□□□ -1.55
RTL9Q8NET4 RN7SKP235-201ENST00000410662 305 ntBASIC5.37□□□□□ -1.55
RTL9Q8NET4 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RTL9Q8NET4 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.37□□□□□ -1.55
RTL9Q8NET4 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.37□□□□□ -1.55
RTL9Q8NET4 RPL23AP37-201ENST00000479658 549 ntBASIC5.37□□□□□ -1.55
RTL9Q8NET4 RPS4XP18-201ENST00000495480 763 ntBASIC5.37□□□□□ -1.55
RTL9Q8NET4 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.37□□□□□ -1.55
RTL9Q8NET4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.37□□□□□ -1.55
RTL9Q8NET4 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
RTL9Q8NET4 RNA5SP73-201ENST00000516744 108 ntBASIC5.37□□□□□ -1.55
RTL9Q8NET4 AC068993.1-201ENST00000546724 589 ntBASIC5.37□□□□□ -1.55
RTL9Q8NET4 MIR3158-1-201ENST00000583596 81 ntBASIC5.37□□□□□ -1.55
RTL9Q8NET4 AC008966.2-201ENST00000606157 453 ntBASIC5.37□□□□□ -1.55
RTL9Q8NET4 AC022106.2-201ENST00000620114 757 ntBASIC5.37□□□□□ -1.55
RTL9Q8NET4 AC112200.1-201ENST00000625015 234 ntBASIC5.37□□□□□ -1.55
RTL9Q8NET4 FP325313.1-201ENST00000638228 703 ntBASIC5.37□□□□□ -1.55
RTL9Q8NET4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTL9Q8NET4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RTL9Q8NET4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RTL9Q8NET4 AC017104.4-201ENST00000636283 1592 ntBASIC5.37□□□□□ -1.55
RTL9Q8NET4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTL9Q8NET4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTL9Q8NET4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.37□□□□□ -1.55
RTL9Q8NET4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.36□□□□□ -1.55
RTL9Q8NET4 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.36□□□□□ -1.55
RTL9Q8NET4 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RTL9Q8NET4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.36□□□□□ -1.55
RTL9Q8NET4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTL9Q8NET4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.36□□□□□ -1.55
RTL9Q8NET4 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTL9Q8NET4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RTL9Q8NET4 MIR23A-201ENST00000385245 73 ntBASIC5.36□□□□□ -1.55
RTL9Q8NET4 ATP5F1P3-201ENST00000397213 657 ntBASIC5.36□□□□□ -1.55
RTL9Q8NET4 EIF4A1P3-201ENST00000411521 244 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms