Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 AC104763.1-201ENST00000475274 360 ntBASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 AC137768.1-201ENST00000549998 553 ntBASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 AL160290.3-201ENST00000604869 165 ntBASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 AC012603.1-201ENST00000606424 528 ntBASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 AC026368.1-201ENST00000614934 690 ntBASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 CPHL1P-201ENST00000461341 3407 ntBASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC112Q8NEF3 NOL8P1-201ENST00000508336 3529 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 RN7SKP224-201ENST00000364140 325 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 AC007068.1-201ENST00000396690 844 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 CYB5AP4-201ENST00000396692 399 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 FAR2P2-201ENST00000413041 594 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 AL590139.1-201ENST00000416267 400 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 AL807761.1-201ENST00000417622 171 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 FAR2P4-202ENST00000425399 584 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 GSTA7P-201ENST00000438425 448 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 RN7SL860P-201ENST00000473738 223 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 AC108043.1-201ENST00000512696 574 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 SNORA26.10-201ENST00000516427 141 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 IGKV1-32-201ENST00000519290 311 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 MIR4737-201ENST00000583979 81 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 AF230666.2-201ENST00000602328 725 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 AL359715.5-201ENST00000623431 443 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 AC019278.1-201ENST00000623516 479 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 SAMMSON-226ENST00000642089 1582 ntBASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC112Q8NEF3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 SNORA56-201ENST00000383966 129 ntBASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 RPL26P29-201ENST00000415623 438 ntBASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 RAC1P3-201ENST00000416129 580 ntBASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 AC092647.1-201ENST00000420654 287 ntBASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 AL391219.1-201ENST00000422570 483 ntBASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 OR2B7P-201ENST00000429302 934 ntBASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 AC017037.1-201ENST00000508460 471 ntBASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 GCSHP4-201ENST00000538792 439 ntBASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 AC107016.1-201ENST00000550463 337 ntBASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 MIR3667-201ENST00000581025 74 ntBASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 AC005034.4-201ENST00000603612 899 ntBASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 AL023881.1-201ENST00000621088 301 ntBASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 U3.53-201ENST00000628922 216 ntBASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 AC006971.1-201ENST00000407916 4486 ntBASIC4.85□□□□□ -1.63
CCDC112Q8NEF3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 AC093909.5-201ENST00000621839 1799 ntBASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms