Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU6-729P-201ENST00000384399 107 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 SDHCP2-201ENST00000398565 501 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 GSTA12P-201ENST00000402398 508 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 CENPIP1-201ENST00000425713 902 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 RPS26P2-201ENST00000440331 348 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 MTCO3P43-201ENST00000440974 771 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 RPS15AP29-201ENST00000445539 400 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC069277.2-201ENST00000454211 432 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC108751.2-201ENST00000469993 231 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC113430.1-201ENST00000506872 718 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC016550.3-201ENST00000515706 767 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC109635.6-201ENST00000525487 1113 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC084783.1-201ENST00000565846 910 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 RN7SL176P-201ENST00000580352 264 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 MIR4715-201ENST00000584117 79 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AL135786.2-201ENST00000608422 615 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC005021.1-201ENST00000608730 355 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC019131.2-201ENST00000609071 870 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC019193.2-201ENST00000610012 634 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC092159.4-201ENST00000624944 550 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AC104118.1-201ENST00000607625 1589 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 OR56B2P-202ENST00000641377 2453 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AL672167.1-203ENST00000641299 2975 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 RAD17P1-201ENST00000418130 2042 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AL137100.1-201ENST00000556703 1620 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 AL133268.1-201ENST00000405676 1401 ntBASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 CASC19-204ENST00000641001 2055 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 CPHL1P-201ENST00000461341 3407 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 BMS1P3-201ENST00000372011 932 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 CCNB2P1-201ENST00000399411 1150 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 AL034403.1-201ENST00000399414 885 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 RPL7AP25-201ENST00000423357 805 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 RPS12P10-201ENST00000427031 377 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 AP001324.1-201ENST00000428553 399 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 MTND4LP7-201ENST00000431728 294 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 AL450263.2-201ENST00000439400 589 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 ARL4AP3-201ENST00000441452 574 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 AL627224.1-201ENST00000448334 444 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 AC107015.1-201ENST00000466902 747 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 RPL23AP37-201ENST00000479658 549 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 RPS4XP18-201ENST00000495480 763 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 AP000859.1-201ENST00000525536 307 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 ADAD1P2-201ENST00000588476 646 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 MTCO2P22-201ENST00000603246 681 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 AC023762.1-201ENST00000603280 584 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 AC115286.1-201ENST00000604298 434 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 AL121890.2-201ENST00000617644 465 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 AC079298.2-201ENST00000623885 459 ntBASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms