Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.33□□□□□ -1.56
VRK3Q8IV63 NCLP2-201ENST00000416078 1462 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 ZNF833P-201ENST00000424938 1494 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC073429.2-201ENST00000569694 1444 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VRK3Q8IV63 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VRK3Q8IV63 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VRK3Q8IV63 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC092681.1-201ENST00000297369 291 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 FAM3C2-201ENST00000312214 681 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VRK3Q8IV63 MIR133B-201ENST00000362210 119 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 Y_RNA.88-201ENST00000363029 99 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VRK3Q8IV63 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 GSTA12P-201ENST00000402398 508 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 AL133388.1-201ENST00000404509 287 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 ZNF603P-201ENST00000405613 487 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 PRUNEP1-201ENST00000425846 705 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC105399.1-202ENST00000447303 205 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 AL050341.1-201ENST00000447743 313 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 RN7SL51P-201ENST00000468230 285 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 CCDC75P1-201ENST00000469247 791 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC090589.1-201ENST00000473109 362 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 CBX3P3-201ENST00000508108 532 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC113347.3-201ENST00000509113 148 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC079140.3-201ENST00000511111 550 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC010285.3-201ENST00000511668 676 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC097486.1-201ENST00000515331 210 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 SEPT10P1-201ENST00000517342 1162 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 OR4A43P-201ENST00000532938 908 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC027104.1-201ENST00000563702 681 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 MTCO3P24-201ENST00000572729 782 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC090181.2-201ENST00000602975 672 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 SUGT1P3-202ENST00000604259 383 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC138749.5-201ENST00000611461 208 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC100793.4-201ENST00000613683 429 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 MIR8080-201ENST00000622224 89 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 AL359757.1-201ENST00000623176 255 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VRK3Q8IV63 AL360270.2-201ENST00000562952 5985 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VRK3Q8IV63 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VRK3Q8IV63 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VRK3Q8IV63 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VRK3Q8IV63 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VRK3Q8IV63 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.32□□□□□ -1.56
VRK3Q8IV63 AP001284.1-201ENST00000528393 2118 ntBASIC5.32□□□□□ -1.56
VRK3Q8IV63 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VRK3Q8IV63 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VRK3Q8IV63 AL603750.1-201ENST00000624216 1717 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VRK3Q8IV63 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VRK3Q8IV63 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
VRK3Q8IV63 AC079298.1-201ENST00000625026 1619 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.31□□□□□ -1.56
VRK3Q8IV63 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VRK3Q8IV63 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VRK3Q8IV63 MIR323A-201ENST00000362199 86 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 RNA5SP132-201ENST00000364725 118 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 RNU1-77P-201ENST00000390868 162 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 U3.25-201ENST00000391209 220 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 CHMP1B2P-201ENST00000399581 597 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VRK3Q8IV63 MTND1P21-201ENST00000412991 285 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 MTCO2P34-201ENST00000421994 607 ntBASIC5.31□□□□□ -1.56
VRK3Q8IV63 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms