Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD2Q8IV50 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
LYSMD2Q8IV50 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD2Q8IV50 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.25□□□□□ -1.57
LYSMD2Q8IV50 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC100810.3-201ENST00000633189 2240 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AL590763.1-201ENST00000398297 1545 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 THAP12P5-201ENST00000405864 2275 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AL138847.1-201ENST00000258651 546 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 SNORA43.1-201ENST00000364863 140 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 SNORA75-201ENST00000384158 137 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC007066.1-201ENST00000392902 381 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 RPL11P3-201ENST00000395256 523 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 HMGB1P11-201ENST00000413899 637 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC008280.1-201ENST00000418851 412 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 UBTFL3-201ENST00000418934 1024 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC009965.2-201ENST00000425328 970 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC009303.1-201ENST00000426307 352 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 RPSAP65-201ENST00000429660 595 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 VDAC1P6-201ENST00000430062 855 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 NMNAT1P2-201ENST00000435192 860 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 LARP1BP3-201ENST00000437229 869 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AL139135.2-201ENST00000445040 433 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 RPS15AP1-201ENST00000457423 391 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 UBTFL6-201ENST00000477929 1024 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC011825.1-201ENST00000484967 388 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 RN7SL868P-201ENST00000485915 303 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 RPL23AP40-201ENST00000487630 390 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC106760.2-201ENST00000504159 619 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC109464.2-201ENST00000510242 943 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 MTND5P4-201ENST00000514978 288 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 RNU6-202P-201ENST00000515998 96 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 RNU6-1178P-201ENST00000516674 107 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 OR4A12P-201ENST00000530847 918 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 GTF2IP22-201ENST00000554443 182 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC037479.1-201ENST00000558361 625 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 MIR4685-201ENST00000578185 69 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC073046.2-201ENST00000604756 527 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC107214.2-201ENST00000608204 634 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC243773.3-201ENST00000613270 256 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC138932.5-201ENST00000617759 563 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC007347.2-201ENST00000623044 180 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AL356596.1-201ENST00000624230 379 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC130304.1-201ENST00000622942 2385 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.24□□□□□ -1.57
LYSMD2Q8IV50 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LYSMD2Q8IV50 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD2Q8IV50 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LYSMD2Q8IV50 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.23□□□□□ -1.57
LYSMD2Q8IV50 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD2Q8IV50 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD2Q8IV50 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD2Q8IV50 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD2Q8IV50 RN7SKP1-201ENST00000365525 307 ntBASIC5.23□□□□□ -1.57
LYSMD2Q8IV50 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD2Q8IV50 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LYSMD2Q8IV50 PRRC2CP1-201ENST00000404428 159 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms