Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 CR383656.6-201ENST00000550518 394 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AL390334.1-201ENST00000556395 450 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AC011374.2-201ENST00000607135 526 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AL355816.1-201ENST00000607951 118 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AC097460.3-201ENST00000623099 442 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 OR2L1P-202ENST00000641567 1023 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PRPF39Q86UA1 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PRPF39Q86UA1 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
PRPF39Q86UA1 AC015813.6-201ENST00000624409 5808 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 AL451142.2-201ENST00000429076 2090 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 SNORA70.10-201ENST00000384515 134 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 RNU6-796P-201ENST00000391086 107 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 ATF1P1-201ENST00000406040 927 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 Y_RNA.625-201ENST00000411256 107 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 QRSL1P2-201ENST00000418582 964 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 USP9YP9-201ENST00000429406 715 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 AC005189.1-201ENST00000431286 310 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 AC112498.1-201ENST00000444401 332 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 RPL7P55-201ENST00000450522 746 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 AC093166.2-201ENST00000455969 1017 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 RN7SL319P-201ENST00000480656 221 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 AC105233.1-201ENST00000498840 781 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 AC138938.1-201ENST00000515431 782 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 AC005972.3-201ENST00000606304 481 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 AL158211.2-201ENST00000607282 395 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 MIR6798-201ENST00000612887 67 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 AC097372.4-201ENST00000625025 466 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 AC083865.1-201ENST00000636634 831 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.08□□□□□ -1.6
PRPF39Q86UA1 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.08□□□□□ -1.6
PRPF39Q86UA1 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 IRF5P1-201ENST00000504852 2164 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 RN7SKP224-201ENST00000364140 325 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 RNU6-609P-201ENST00000365459 107 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 RNU6-1005P-201ENST00000384519 107 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 SNORA40.4-201ENST00000390971 128 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 ATP5F1P6-201ENST00000402768 767 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 TCEA1P4-201ENST00000415066 844 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 VN1R42P-201ENST00000424651 344 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 AL450263.2-201ENST00000439400 589 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 AL137845.2-201ENST00000444292 988 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 MTND2P8-201ENST00000450555 1025 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 APOOP2-201ENST00000461561 539 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.07□□□□□ -1.6
PRPF39Q86UA1 AC010285.3-201ENST00000511668 676 ntBASIC5.07□□□□□ -1.6
PRPF39Q86UA1 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms