Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MIR3124-201ENST00000582636 67 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.97
VPS13DQ5THJ4 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC2.78□□□□□ -1.97
VPS13DQ5THJ4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
VPS13DQ5THJ4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 NPM1P28-201ENST00000492269 840 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AC003985.2-201ENST00000562268 1669 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 HMGB3P19-201ENST00000403971 560 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 GLS-204ENST00000409428 816 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 RN7SKP177-201ENST00000410567 355 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AC091286.1-201ENST00000431233 461 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 MIR4472-2-201ENST00000582069 67 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AC024560.2-201ENST00000507981 1497 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AL136164.3-201ENST00000624429 3978 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 ATP5F1P4-201ENST00000397288 746 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 DNAJA1P1-201ENST00000425106 1187 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 RPL7P15-201ENST00000461190 712 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AC006499.5-201ENST00000505037 514 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 HPRT1P2-201ENST00000505250 544 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AC079171.1-201ENST00000568788 914 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AL031985.2-201ENST00000600955 480 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AL606490.9-201ENST00000603331 271 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AL645927.2-201ENST00000618350 349 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 MIR3651-201ENST00000630427 90 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 SUPT16HP1-201ENST00000537175 3133 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 RPS4XP18-201ENST00000495480 763 ntBASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13DQ5THJ4 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 HMGB2P1-201ENST00000591146 634 ntBASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 AL034408.1-202ENST00000636088 415 ntBASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 AP001002.1-201ENST00000625148 1513 ntBASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 AC090602.1-201ENST00000469695 252 ntBASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 RPL23AP65-201ENST00000475608 468 ntBASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 AC015722.2-201ENST00000622210 551 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms