Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 Y_RNA.367-201ENST00000365544 101 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 BX323014.1-201ENST00000412876 237 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 AL136133.1-201ENST00000413694 376 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 AC092634.6-201ENST00000418558 192 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 RPSAP65-201ENST00000429660 595 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 FGF12-202ENST00000430714 603 ntTSL 2 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 RPL14P5-201ENST00000436474 730 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 FUNDC2P2-202ENST00000443452 493 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 HMGN1P2-201ENST00000445197 310 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 RNU7-180P-201ENST00000459240 63 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 CBX5P1-201ENST00000468470 561 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 RPS27P26-201ENST00000494583 239 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 RPL23AP80-201ENST00000495605 424 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 Y_RNA.670-201ENST00000516255 105 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 IGHV3-57-201ENST00000520143 280 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 AC087441.2-201ENST00000529141 262 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 SETP2-201ENST00000553886 926 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 AP004247.3-201ENST00000608682 624 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
VARS2Q5ST30 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
VARS2Q5ST30 AC090643.1-201ENST00000623600 3100 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
VARS2Q5ST30 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
VARS2Q5ST30 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
VARS2Q5ST30 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.9□□□□□ -1.15
VARS2Q5ST30 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
VARS2Q5ST30 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.15
VARS2Q5ST30 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.9□□□□□ -1.15
VARS2Q5ST30 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARS2Q5ST30 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARS2Q5ST30 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VARS2Q5ST30 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 BMPR1APS1-201ENST00000403332 1598 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VARS2Q5ST30 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VARS2Q5ST30 AC026464.2-201ENST00000567834 2421 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 AC006058.1-201ENST00000568686 5067 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VARS2Q5ST30 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARS2Q5ST30 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARS2Q5ST30 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VARS2Q5ST30 RNA5SP429-201ENST00000363688 109 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 RNU6-153P-201ENST00000364422 104 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARS2Q5ST30 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 SNORA22C-201ENST00000384614 134 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 U3.25-201ENST00000391209 220 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 RNU6-1050P-201ENST00000410388 107 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 AC078974.1-201ENST00000411597 223 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VARS2Q5ST30 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 AL138787.1-202ENST00000437804 898 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 AL031659.1-201ENST00000447075 539 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 HSPE1P22-201ENST00000456856 327 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 AL445687.2-201ENST00000458156 728 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 RN7SL836P-201ENST00000476140 296 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 SUMO2P4-201ENST00000504193 276 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 AC116337.1-201ENST00000509680 687 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 AC107393.1-201ENST00000512403 346 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 RNU6-120P-201ENST00000516077 103 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 RNU6-844P-201ENST00000517175 102 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 AC107934.1-201ENST00000522215 217 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 SNX29P2-204ENST00000603801 875 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 AL355365.1-201ENST00000616480 294 ntBASIC7.89□□□□□ -1.15
VARS2Q5ST30 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARS2Q5ST30 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.89□□□□□ -1.15
VARS2Q5ST30 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms