Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.87□□□□□ -1.79
USF2Q15853 AC020634.1-201ENST00000608701 549 ntBASIC3.87□□□□□ -1.79
USF2Q15853 AC023043.4-201ENST00000612081 449 ntBASIC3.87□□□□□ -1.79
USF2Q15853 NF1P10-201ENST00000613227 742 ntBASIC3.87□□□□□ -1.79
USF2Q15853 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.87□□□□□ -1.79
USF2Q15853 AC234782.5-201ENST00000617723 324 ntBASIC3.87□□□□□ -1.79
USF2Q15853 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.87□□□□□ -1.79
USF2Q15853 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
USF2Q15853 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USF2Q15853 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.87□□□□□ -1.79
USF2Q15853 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.87□□□□□ -1.79
USF2Q15853 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.87□□□□□ -1.79
USF2Q15853 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
USF2Q15853 DCAF13P1-201ENST00000495256 1330 ntBASIC3.87□□□□□ -1.79
USF2Q15853 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
USF2Q15853 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
USF2Q15853 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USF2Q15853 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USF2Q15853 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
USF2Q15853 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USF2Q15853 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
USF2Q15853 SNORA73.1-201ENST00000363107 205 ntBASIC3.86□□□□□ -1.79
USF2Q15853 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
USF2Q15853 RNU4-34P-201ENST00000410431 124 ntBASIC3.86□□□□□ -1.79
USF2Q15853 RNA5SP498-201ENST00000411342 120 ntBASIC3.86□□□□□ -1.79
USF2Q15853 NPM1P4-201ENST00000414095 812 ntBASIC3.86□□□□□ -1.79
USF2Q15853 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.86□□□□□ -1.79
USF2Q15853 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.86□□□□□ -1.79
USF2Q15853 AL391219.1-201ENST00000422570 483 ntBASIC3.86□□□□□ -1.79
USF2Q15853 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.86□□□□□ -1.79
USF2Q15853 UBE2V2P1-201ENST00000434717 398 ntBASIC3.86□□□□□ -1.79
USF2Q15853 RPL7P28-201ENST00000437739 740 ntBASIC3.86□□□□□ -1.79
USF2Q15853 AC073052.1-201ENST00000440417 714 ntBASIC3.86□□□□□ -1.79
USF2Q15853 AL353748.1-201ENST00000440753 474 ntBASIC3.86□□□□□ -1.79
USF2Q15853 AC011753.3-201ENST00000443436 406 ntBASIC3.86□□□□□ -1.79
USF2Q15853 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
USF2Q15853 MRPL48P1-201ENST00000445390 636 ntBASIC3.86□□□□□ -1.79
USF2Q15853 AL133477.1-201ENST00000457472 514 ntBASIC3.86□□□□□ -1.79
USF2Q15853 RPS17P2-201ENST00000461663 408 ntBASIC3.86□□□□□ -1.79
USF2Q15853 RN7SL205P-201ENST00000490174 284 ntBASIC3.86□□□□□ -1.79
USF2Q15853 RPS4XP14-201ENST00000493072 781 ntBASIC3.86□□□□□ -1.79
USF2Q15853 RPL30P11-201ENST00000495304 339 ntBASIC3.86□□□□□ -1.79
USF2Q15853 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.86□□□□□ -1.79
USF2Q15853 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USF2Q15853 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.86□□□□□ -1.79
USF2Q15853 AC067904.2-201ENST00000517322 1283 ntBASIC3.86□□□□□ -1.79
USF2Q15853 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USF2Q15853 IGKV2-18-201ENST00000522607 343 ntBASIC3.86□□□□□ -1.79
USF2Q15853 OR10G5P-201ENST00000532733 358 ntBASIC3.86□□□□□ -1.79
USF2Q15853 AC092851.1-201ENST00000535964 478 ntBASIC3.86□□□□□ -1.79
USF2Q15853 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USF2Q15853 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.86□□□□□ -1.79
USF2Q15853 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC3.86□□□□□ -1.79
USF2Q15853 MTND6P33-201ENST00000571794 183 ntBASIC3.86□□□□□ -1.79
USF2Q15853 MIR3176-201ENST00000582210 90 ntBASIC3.86□□□□□ -1.79
USF2Q15853 AC095055.1-201ENST00000603472 1113 ntBASIC3.86□□□□□ -1.79
USF2Q15853 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.86□□□□□ -1.79
USF2Q15853 AP003117.2-201ENST00000606010 545 ntBASIC3.86□□□□□ -1.79
USF2Q15853 BX323046.1-201ENST00000610145 535 ntBASIC3.86□□□□□ -1.79
USF2Q15853 CR392039.4-201ENST00000624968 501 ntBASIC3.86□□□□□ -1.79
USF2Q15853 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USF2Q15853 AL359922.3-201ENST00000624779 1670 ntBASIC3.86□□□□□ -1.79
USF2Q15853 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
USF2Q15853 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.86□□□□□ -1.79
USF2Q15853 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USF2Q15853 SAGE2P-201ENST00000420011 2126 ntBASIC3.86□□□□□ -1.79
USF2Q15853 CASC19-206ENST00000641028 1430 ntBASIC3.86□□□□□ -1.79
USF2Q15853 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.86□□□□□ -1.79
USF2Q15853 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
USF2Q15853 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USF2Q15853 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
USF2Q15853 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USF2Q15853 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USF2Q15853 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
USF2Q15853 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USF2Q15853 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.85□□□□□ -1.79
USF2Q15853 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.85□□□□□ -1.79
USF2Q15853 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USF2Q15853 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
USF2Q15853 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.85□□□□□ -1.79
USF2Q15853 ATP5HP3-201ENST00000396994 486 ntBASIC3.85□□□□□ -1.79
USF2Q15853 AL592291.1-201ENST00000403830 352 ntBASIC3.85□□□□□ -1.79
USF2Q15853 AL391361.1-201ENST00000405580 489 ntBASIC3.85□□□□□ -1.79
USF2Q15853 AP000534.2-201ENST00000412729 568 ntBASIC3.85□□□□□ -1.79
USF2Q15853 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.85□□□□□ -1.79
USF2Q15853 AC004987.3-201ENST00000413879 771 ntBASIC3.85□□□□□ -1.79
USF2Q15853 GTF3AP1-201ENST00000416942 1004 ntBASIC3.85□□□□□ -1.79
USF2Q15853 QRSL1P2-201ENST00000418582 964 ntBASIC3.85□□□□□ -1.79
USF2Q15853 SLC35E1P1-201ENST00000419313 864 ntBASIC3.85□□□□□ -1.79
USF2Q15853 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.85□□□□□ -1.79
USF2Q15853 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.85□□□□□ -1.79
USF2Q15853 NDUFA5P10-201ENST00000432147 357 ntBASIC3.85□□□□□ -1.79
USF2Q15853 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.85□□□□□ -1.79
USF2Q15853 OR52B5P-201ENST00000435337 951 ntBASIC3.85□□□□□ -1.79
USF2Q15853 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC3.85□□□□□ -1.79
USF2Q15853 ELOCP11-201ENST00000436690 332 ntBASIC3.85□□□□□ -1.79
USF2Q15853 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
USF2Q15853 ELOCP16-201ENST00000444494 332 ntBASIC3.85□□□□□ -1.79
USF2Q15853 AP000873.1-201ENST00000463987 400 ntBASIC3.85□□□□□ -1.79
USF2Q15853 RN7SL799P-201ENST00000475891 298 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms