Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CX3CL1P78423 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.21□□□□□ -1.74
CX3CL1P78423 GSTM3P2-201ENST00000412746 530 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.21□□□□□ -1.74
CX3CL1P78423 AC092648.1-201ENST00000425870 423 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 NANOGP4-201ENST00000427230 913 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.21□□□□□ -1.74
CX3CL1P78423 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.21□□□□□ -1.74
CX3CL1P78423 RPL7L1P9-201ENST00000431298 745 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 UBE2V1P5-201ENST00000440070 405 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.21□□□□□ -1.74
CX3CL1P78423 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.21□□□□□ -1.74
CX3CL1P78423 MTCYBP42-201ENST00000444653 1130 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 MTND1P33-201ENST00000446251 917 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 AC104634.1-201ENST00000452720 462 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 OFD1P3Y-201ENST00000453312 783 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 MRPL35P4-201ENST00000453682 566 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 RN7SL809P-201ENST00000482040 297 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.21□□□□□ -1.74
CX3CL1P78423 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.21□□□□□ -1.74
CX3CL1P78423 AC093720.1-201ENST00000505681 714 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 snoZ278.1-201ENST00000517059 112 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.21□□□□□ -1.74
CX3CL1P78423 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.21□□□□□ -1.74
CX3CL1P78423 AC100784.1-201ENST00000522790 310 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 DEFB130C-202ENST00000530001 230 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.21□□□□□ -1.74
CX3CL1P78423 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.21□□□□□ -1.74
CX3CL1P78423 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CX3CL1P78423 AL390726.5-202ENST00000564800 256 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.21□□□□□ -1.74
CX3CL1P78423 FKBP1AP1-201ENST00000594588 318 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 AC002487.1-201ENST00000604565 994 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.21□□□□□ -1.74
CX3CL1P78423 AC018926.3-201ENST00000618841 406 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 CR392039.4-201ENST00000624968 501 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.21□□□□□ -1.74
CX3CL1P78423 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CX3CL1P78423 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CX3CL1P78423 SOCS5P3-201ENST00000425115 1576 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 AC011447.7-201ENST00000624228 1590 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.21□□□□□ -1.74
CX3CL1P78423 AC090017.1-201ENST00000548612 1779 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 AC100778.3-201ENST00000580060 1750 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 AC046144.1-201ENST00000478559 1853 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.21□□□□□ -1.74
CX3CL1P78423 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CX3CL1P78423 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.21□□□□□ -1.74
CX3CL1P78423 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CX3CL1P78423 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.21□□□□□ -1.74
CX3CL1P78423 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CX3CL1P78423 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.21□□□□□ -1.74
CX3CL1P78423 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.21□□□□□ -1.74
CX3CL1P78423 AC119744.1-201ENST00000454746 1715 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CX3CL1P78423 AL353743.4-201ENST00000422653 1547 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.21□□□□□ -1.74
CX3CL1P78423 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CX3CL1P78423 CIR1P2-201ENST00000514821 1342 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CX3CL1P78423 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.2□□□□□ -1.74
CX3CL1P78423 OR55B1P-203ENST00000641518 2602 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CX3CL1P78423 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CX3CL1P78423 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CX3CL1P78423 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CX3CL1P78423 RNU1-149P-201ENST00000390870 161 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 ANAPC10P1-201ENST00000395991 556 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 AL359643.1-201ENST00000404109 423 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 RNA5SP296-201ENST00000410523 111 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 RNU6-603P-201ENST00000411403 107 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 RPL12P9-201ENST00000412942 488 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.2□□□□□ -1.74
CX3CL1P78423 AC104333.2-201ENST00000422630 192 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 MTND2P5-201ENST00000432656 1006 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 RPL21P110-201ENST00000433345 446 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 USP9YP24-201ENST00000434374 697 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.2□□□□□ -1.74
CX3CL1P78423 USP9YP17-201ENST00000444617 696 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 CYCSP24-201ENST00000445119 316 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 PPIAP20-201ENST00000449839 135 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 DNAJB5P1-201ENST00000454004 806 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 RPS3AP53-201ENST00000454716 778 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 RPL37P3-201ENST00000456825 293 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 PRDX3P4-201ENST00000470828 747 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.2□□□□□ -1.74
CX3CL1P78423 RPL7P39-201ENST00000481157 744 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.2□□□□□ -1.74
CX3CL1P78423 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.2□□□□□ -1.74
CX3CL1P78423 RPL7L1P4-201ENST00000513004 707 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 RNU6-941P-201ENST00000516346 108 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.2□□□□□ -1.74
CX3CL1P78423 IGKV2-18-201ENST00000522607 343 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 MTCO3P15-201ENST00000526563 574 ntBASIC4.2□□□□□ -1.74
CX3CL1P78423 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.2□□□□□ -1.74
CX3CL1P78423 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.2□□□□□ -1.74
CX3CL1P78423 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.2□□□□□ -1.74
CX3CL1P78423 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms