Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 AC005008.1-201ENST00000456151 612 ntBASIC4.31□□□□□ -1.72
VSX2P58304 NDUFA5P9-201ENST00000472609 340 ntBASIC4.31□□□□□ -1.72
VSX2P58304 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.31□□□□□ -1.72
VSX2P58304 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.31□□□□□ -1.72
VSX2P58304 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
VSX2P58304 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.31□□□□□ -1.72
VSX2P58304 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.31□□□□□ -1.72
VSX2P58304 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.31□□□□□ -1.72
VSX2P58304 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.31□□□□□ -1.72
VSX2P58304 AC091178.1-203ENST00000584586 279 ntBASIC4.31□□□□□ -1.72
VSX2P58304 AC115286.1-201ENST00000604298 434 ntBASIC4.31□□□□□ -1.72
VSX2P58304 AL713998.2-201ENST00000604538 1198 ntBASIC4.31□□□□□ -1.72
VSX2P58304 AC020634.1-201ENST00000608701 549 ntBASIC4.31□□□□□ -1.72
VSX2P58304 AC012409.3-201ENST00000611343 981 ntBASIC4.31□□□□□ -1.72
VSX2P58304 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 NF1P10-201ENST00000613227 742 ntBASIC4.31□□□□□ -1.72
VSX2P58304 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.31□□□□□ -1.72
VSX2P58304 OR2L1P-202ENST00000641567 1023 ntBASIC4.31□□□□□ -1.72
VSX2P58304 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.31□□□□□ -1.72
VSX2P58304 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.31□□□□□ -1.72
VSX2P58304 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
VSX2P58304 MAPK10-303ENST00000641324 3959 ntBASIC4.3□□□□□ -1.72
VSX2P58304 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.3□□□□□ -1.72
VSX2P58304 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.3□□□□□ -1.72
VSX2P58304 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VSX2P58304 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.3□□□□□ -1.72
VSX2P58304 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
VSX2P58304 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VSX2P58304 U3.22-201ENST00000391120 215 ntBASIC4.3□□□□□ -1.72
VSX2P58304 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.3□□□□□ -1.72
VSX2P58304 AC096644.3-201ENST00000416788 338 ntBASIC4.3□□□□□ -1.72
VSX2P58304 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.3□□□□□ -1.72
VSX2P58304 Z74021.1-201ENST00000423610 407 ntBASIC4.3□□□□□ -1.72
VSX2P58304 MTCO1P51-201ENST00000427672 1060 ntBASIC4.3□□□□□ -1.72
VSX2P58304 FTH1P16-201ENST00000435241 552 ntBASIC4.3□□□□□ -1.72
VSX2P58304 AC012671.1-201ENST00000451912 203 ntBASIC4.3□□□□□ -1.72
VSX2P58304 Z95152.1-201ENST00000453556 656 ntBASIC4.3□□□□□ -1.72
VSX2P58304 RPL7AP28-201ENST00000464513 571 ntBASIC4.3□□□□□ -1.72
VSX2P58304 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.3□□□□□ -1.72
VSX2P58304 AL133372.1-201ENST00000493565 745 ntBASIC4.3□□□□□ -1.72
VSX2P58304 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.3□□□□□ -1.72
VSX2P58304 C1GALT1P3-201ENST00000522049 819 ntBASIC4.3□□□□□ -1.72
VSX2P58304 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.3□□□□□ -1.72
VSX2P58304 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.3□□□□□ -1.72
VSX2P58304 MIR4277-201ENST00000578298 84 ntBASIC4.3□□□□□ -1.72
VSX2P58304 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
VSX2P58304 AC008966.2-201ENST00000606157 453 ntBASIC4.3□□□□□ -1.72
VSX2P58304 AC026979.4-201ENST00000606555 645 ntBASIC4.3□□□□□ -1.72
VSX2P58304 AL121873.1-201ENST00000616013 524 ntBASIC4.3□□□□□ -1.72
VSX2P58304 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.3□□□□□ -1.72
VSX2P58304 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.3□□□□□ -1.72
VSX2P58304 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.3□□□□□ -1.72
VSX2P58304 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.3□□□□□ -1.72
VSX2P58304 AC125257.1-201ENST00000560400 2930 ntBASIC4.3□□□□□ -1.72
VSX2P58304 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VSX2P58304 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.3□□□□□ -1.72
VSX2P58304 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.3□□□□□ -1.72
VSX2P58304 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
VSX2P58304 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.3□□□□□ -1.72
VSX2P58304 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
VSX2P58304 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
VSX2P58304 CPHL1P-201ENST00000461341 3407 ntBASIC4.3□□□□□ -1.72
VSX2P58304 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
VSX2P58304 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VSX2P58304 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.29□□□□□ -1.72
VSX2P58304 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.29□□□□□ -1.72
VSX2P58304 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VSX2P58304 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
VSX2P58304 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VSX2P58304 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VSX2P58304 LINC00622-201ENST00000562811 1570 ntBASIC4.29□□□□□ -1.72
VSX2P58304 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.29□□□□□ -1.72
VSX2P58304 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VSX2P58304 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VSX2P58304 FCF1P5-201ENST00000406490 482 ntBASIC4.29□□□□□ -1.72
VSX2P58304 AL512430.2-201ENST00000406786 339 ntBASIC4.29□□□□□ -1.72
VSX2P58304 AC098592.2-201ENST00000413158 265 ntBASIC4.29□□□□□ -1.72
VSX2P58304 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.29□□□□□ -1.72
VSX2P58304 RAD23BP1-201ENST00000421404 1227 ntBASIC4.29□□□□□ -1.72
VSX2P58304 NPM1P26-201ENST00000426339 738 ntBASIC4.29□□□□□ -1.72
VSX2P58304 AC016712.1-201ENST00000431088 378 ntBASIC4.29□□□□□ -1.72
VSX2P58304 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.29□□□□□ -1.72
VSX2P58304 RPL23AP43-201ENST00000446445 471 ntBASIC4.29□□□□□ -1.72
VSX2P58304 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.29□□□□□ -1.72
VSX2P58304 RPS27AP17-201ENST00000463344 455 ntBASIC4.29□□□□□ -1.72
VSX2P58304 RPS4XP18-201ENST00000495480 763 ntBASIC4.29□□□□□ -1.72
VSX2P58304 AC015795.1-201ENST00000513669 327 ntBASIC4.29□□□□□ -1.72
VSX2P58304 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.29□□□□□ -1.72
VSX2P58304 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.29□□□□□ -1.72
VSX2P58304 AC009643.1-201ENST00000532030 391 ntBASIC4.29□□□□□ -1.72
VSX2P58304 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms