Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.2□□□□□ -1.58
NUP98P52948 LINC01881-201ENST00000416103 412 ntBASIC5.2□□□□□ -1.58
NUP98P52948 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.2□□□□□ -1.58
NUP98P52948 PPIAP13-201ENST00000434706 478 ntBASIC5.2□□□□□ -1.58
NUP98P52948 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.2□□□□□ -1.58
NUP98P52948 VN1R34P-201ENST00000447387 883 ntBASIC5.2□□□□□ -1.58
NUP98P52948 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.2□□□□□ -1.58
NUP98P52948 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.2□□□□□ -1.58
NUP98P52948 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.2□□□□□ -1.58
NUP98P52948 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUP98P52948 AC092162.3-201ENST00000624511 1624 ntBASIC5.2□□□□□ -1.58
NUP98P52948 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
NUP98P52948 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.2□□□□□ -1.58
NUP98P52948 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.19□□□□□ -1.58
NUP98P52948 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
NUP98P52948 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.19□□□□□ -1.58
NUP98P52948 RNU6ATAC-201ENST00000408749 126 ntBASIC5.19□□□□□ -1.58
NUP98P52948 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.19□□□□□ -1.58
NUP98P52948 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUP98P52948 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.19□□□□□ -1.58
NUP98P52948 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.19□□□□□ -1.58
NUP98P52948 RPS4XP15-201ENST00000489210 795 ntBASIC5.19□□□□□ -1.58
NUP98P52948 HPRT1P2-201ENST00000505250 544 ntBASIC5.19□□□□□ -1.58
NUP98P52948 NPM1P21-201ENST00000513394 762 ntBASIC5.19□□□□□ -1.58
NUP98P52948 OR5M7P-201ENST00000526140 972 ntBASIC5.19□□□□□ -1.58
NUP98P52948 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.19□□□□□ -1.58
NUP98P52948 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
NUP98P52948 AC022655.2-201ENST00000577280 318 ntBASIC5.19□□□□□ -1.58
NUP98P52948 MIR5684-201ENST00000585074 65 ntBASIC5.19□□□□□ -1.58
NUP98P52948 AC114878.2-201ENST00000604863 1251 ntBASIC5.19□□□□□ -1.58
NUP98P52948 AC005086.4-201ENST00000623065 213 ntBASIC5.19□□□□□ -1.58
NUP98P52948 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.19□□□□□ -1.58
NUP98P52948 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUP98P52948 AC003985.2-201ENST00000562268 1669 ntBASIC5.19□□□□□ -1.58
NUP98P52948 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUP98P52948 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUP98P52948 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NUP98P52948 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUP98P52948 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NUP98P52948 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUP98P52948 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
NUP98P52948 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NUP98P52948 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUP98P52948 SNORA70.4-201ENST00000365509 134 ntBASIC5.18□□□□□ -1.58
NUP98P52948 MIR1179-201ENST00000408703 91 ntBASIC5.18□□□□□ -1.58
NUP98P52948 VDAC1P9-201ENST00000412766 841 ntBASIC5.18□□□□□ -1.58
NUP98P52948 GOT2P5-201ENST00000433995 546 ntBASIC5.18□□□□□ -1.58
NUP98P52948 AC007389.2-201ENST00000434630 306 ntBASIC5.18□□□□□ -1.58
NUP98P52948 AC022336.1-201ENST00000475510 337 ntBASIC5.18□□□□□ -1.58
NUP98P52948 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUP98P52948 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.18□□□□□ -1.58
NUP98P52948 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NUP98P52948 PHBP17-201ENST00000528576 541 ntBASIC5.18□□□□□ -1.58
NUP98P52948 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP98P52948 AC002069.2-201ENST00000603580 883 ntBASIC5.18□□□□□ -1.58
NUP98P52948 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUP98P52948 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NUP98P52948 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUP98P52948 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NUP98P52948 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.18□□□□□ -1.58
NUP98P52948 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUP98P52948 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.18□□□□□ -1.58
NUP98P52948 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NUP98P52948 EOGT-210ENST00000615922 1931 ntBASIC5.18□□□□□ -1.58
NUP98P52948 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUP98P52948 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
NUP98P52948 RNU4-6P-201ENST00000410804 122 ntBASIC5.18□□□□□ -1.58
NUP98P52948 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUP98P52948 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP98P52948 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP98P52948 AC090151.1-201ENST00000520784 730 ntBASIC5.18□□□□□ -1.58
NUP98P52948 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.18□□□□□ -1.58
NUP98P52948 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NUP98P52948 AC090312.1-201ENST00000580637 348 ntBASIC5.18□□□□□ -1.58
NUP98P52948 SLC25A36P1-201ENST00000590111 465 ntBASIC5.18□□□□□ -1.58
NUP98P52948 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.18□□□□□ -1.58
NUP98P52948 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.18□□□□□ -1.58
NUP98P52948 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.18□□□□□ -1.58
NUP98P52948 TCP11X1-202ENST00000622971 1372 ntBASIC5.18□□□□□ -1.58
NUP98P52948 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
NUP98P52948 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NUP98P52948 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUP98P52948 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
NUP98P52948 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUP98P52948 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.17□□□□□ -1.58
NUP98P52948 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUP98P52948 ZNF402P-201ENST00000404435 3100 ntBASIC5.17□□□□□ -1.58
NUP98P52948 RNU6-213P-201ENST00000384051 104 ntBASIC5.17□□□□□ -1.58
NUP98P52948 U8.11-201ENST00000384699 133 ntBASIC5.17□□□□□ -1.58
NUP98P52948 U8.12-201ENST00000384701 133 ntBASIC5.17□□□□□ -1.58
NUP98P52948 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP98P52948 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.17□□□□□ -1.58
NUP98P52948 U8.18-201ENST00000459285 133 ntBASIC5.17□□□□□ -1.58
NUP98P52948 RPL5P12-201ENST00000477071 851 ntBASIC5.17□□□□□ -1.58
NUP98P52948 BNIP3P41-201ENST00000503774 571 ntBASIC5.17□□□□□ -1.58
NUP98P52948 IFITM8P-201ENST00000522529 394 ntBASIC5.17□□□□□ -1.58
NUP98P52948 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.17□□□□□ -1.58
NUP98P52948 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
NUP98P52948 AP005901.4-201ENST00000577336 569 ntBASIC5.17□□□□□ -1.58
NUP98P52948 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms