Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC6.64□□□□□ -1.35
RNF144AP50876 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.64□□□□□ -1.35
RNF144AP50876 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF144AP50876 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF144AP50876 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF144AP50876 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.64□□□□□ -1.35
RNF144AP50876 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.64□□□□□ -1.35
RNF144AP50876 AL049780.3-201ENST00000624612 1583 ntBASIC6.64□□□□□ -1.35
RNF144AP50876 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RNF144AP50876 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF144AP50876 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF144AP50876 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RNF144AP50876 AC025125.1-201ENST00000624743 1922 ntBASIC6.64□□□□□ -1.35
RNF144AP50876 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF144AP50876 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
RNF144AP50876 AC090337.1-201ENST00000579651 2074 ntBASIC6.64□□□□□ -1.35
RNF144AP50876 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF144AP50876 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.64□□□□□ -1.35
RNF144AP50876 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF144AP50876 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.64□□□□□ -1.35
RNF144AP50876 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
RNF144AP50876 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RNF144AP50876 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
RNF144AP50876 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 MAPK10-323ENST00000641493 3207 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.63□□□□□ -1.35
RNF144AP50876 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.63□□□□□ -1.35
RNF144AP50876 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.63□□□□□ -1.35
RNF144AP50876 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
RNF144AP50876 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.63□□□□□ -1.35
RNF144AP50876 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 Y_RNA.158-201ENST00000363651 101 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 Y_RNA.176-201ENST00000363815 109 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 RNA5SP472-201ENST00000363868 119 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 MIR640-201ENST00000385086 96 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 AC092642.1-201ENST00000392417 425 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 AL034417.1-201ENST00000399343 800 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
RNF144AP50876 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.63□□□□□ -1.35
RNF144AP50876 RN7SKP39-201ENST00000410773 322 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 RNU6-370P-201ENST00000411008 104 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.63□□□□□ -1.35
RNF144AP50876 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.63□□□□□ -1.35
RNF144AP50876 AC007283.2-201ENST00000424739 197 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC6.63□□□□□ -1.35
RNF144AP50876 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 FAM103A2P-201ENST00000444122 354 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 TAB3P1-202ENST00000452645 1634 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 AL356010.1-201ENST00000456364 102 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 RN7SL325P-201ENST00000460434 283 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 TUBBP11-201ENST00000472255 252 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 PDPN-205ENST00000487038 607 ntTSL 2 BASIC6.63□□□□□ -1.35
RNF144AP50876 AC106872.2-201ENST00000494303 480 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 CHCHD2P7-201ENST00000508008 452 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 OR4D12P-201ENST00000509361 911 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 RNU4-29P-201ENST00000515943 174 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.63□□□□□ -1.35
RNF144AP50876 NARSP2-201ENST00000518524 679 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 AC090572.1-201ENST00000519251 160 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.63□□□□□ -1.35
RNF144AP50876 MRPS16P1-201ENST00000523462 412 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 OR5B10P-201ENST00000532869 642 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 COX6CP11-201ENST00000555293 229 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 AC007938.1-201ENST00000562524 2902 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.63□□□□□ -1.35
RNF144AP50876 AC098848.2-201ENST00000588023 330 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.63□□□□□ -1.35
RNF144AP50876 RPSAP66-201ENST00000592196 606 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.63□□□□□ -1.35
RNF144AP50876 AL589765.5-201ENST00000596133 515 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 AC009955.2-201ENST00000597288 542 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 AL136139.1-201ENST00000605568 222 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 PTCHD3P1-201ENST00000612350 537 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 AC083806.3-201ENST00000614016 455 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
RNF144AP50876 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.63□□□□□ -1.35
RNF144AP50876 AC211433.3-201ENST00000623770 375 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 AC091953.2-201ENST00000623979 160 ntBASIC6.63□□□□□ -1.35
RNF144AP50876 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
RNF144AP50876 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.63□□□□□ -1.35
RNF144AP50876 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF144AP50876 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
RNF144AP50876 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.63□□□□□ -1.35
RNF144AP50876 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms