Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 COX6CP17-201ENST00000421389 185 ntBASIC6.24□□□□□ -1.41
MRE11P49959 AL390023.1-201ENST00000428836 262 ntBASIC6.24□□□□□ -1.41
MRE11P49959 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MRE11P49959 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC6.24□□□□□ -1.41
MRE11P49959 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.24□□□□□ -1.41
MRE11P49959 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
MRE11P49959 AL445466.1-201ENST00000448432 357 ntBASIC6.24□□□□□ -1.41
MRE11P49959 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.24□□□□□ -1.41
MRE11P49959 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.24□□□□□ -1.41
MRE11P49959 Z95152.1-201ENST00000453556 656 ntBASIC6.24□□□□□ -1.41
MRE11P49959 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.24□□□□□ -1.41
MRE11P49959 RN7SL385P-201ENST00000468873 276 ntBASIC6.24□□□□□ -1.41
MRE11P49959 MTND2P14-201ENST00000482139 351 ntBASIC6.24□□□□□ -1.41
MRE11P49959 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC6.24□□□□□ -1.41
MRE11P49959 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MRE11P49959 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC6.24□□□□□ -1.41
MRE11P49959 AP000926.4-201ENST00000527351 454 ntBASIC6.24□□□□□ -1.41
MRE11P49959 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.24□□□□□ -1.41
MRE11P49959 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.24□□□□□ -1.41
MRE11P49959 AP003717.3-201ENST00000544832 1180 ntBASIC6.24□□□□□ -1.41
MRE11P49959 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.24□□□□□ -1.41
MRE11P49959 AL110118.1-201ENST00000553543 400 ntBASIC6.24□□□□□ -1.41
MRE11P49959 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.24□□□□□ -1.41
MRE11P49959 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC6.24□□□□□ -1.41
MRE11P49959 MIR4646-201ENST00000580775 63 ntBASIC6.24□□□□□ -1.41
MRE11P49959 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.24□□□□□ -1.41
MRE11P49959 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC6.24□□□□□ -1.41
MRE11P49959 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MRE11P49959 AC007349.4-201ENST00000608114 532 ntBASIC6.24□□□□□ -1.41
MRE11P49959 MIR6839-201ENST00000620425 113 ntBASIC6.24□□□□□ -1.41
MRE11P49959 AC068792.1-201ENST00000621354 417 ntBASIC6.24□□□□□ -1.41
MRE11P49959 AC131159.1-201ENST00000621854 213 ntBASIC6.24□□□□□ -1.41
MRE11P49959 AL136228.1-201ENST00000622221 319 ntBASIC6.24□□□□□ -1.41
MRE11P49959 AP000676.3-201ENST00000623299 569 ntBASIC6.24□□□□□ -1.41
MRE11P49959 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.24□□□□□ -1.41
MRE11P49959 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.24□□□□□ -1.41
MRE11P49959 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.24□□□□□ -1.41
MRE11P49959 OR8B1P-202ENST00000641132 1178 ntBASIC6.24□□□□□ -1.41
MRE11P49959 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MRE11P49959 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
MRE11P49959 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
MRE11P49959 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
MRE11P49959 AC083843.3-201ENST00000623679 2186 ntBASIC6.24□□□□□ -1.41
MRE11P49959 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MRE11P49959 AL359715.4-201ENST00000606629 1436 ntBASIC6.24□□□□□ -1.41
MRE11P49959 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
MRE11P49959 PWAR1-201ENST00000624188 2414 ntBASIC6.24□□□□□ -1.41
MRE11P49959 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
MRE11P49959 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
MRE11P49959 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
MRE11P49959 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
MRE11P49959 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
MRE11P49959 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
MRE11P49959 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.23□□□□□ -1.41
MRE11P49959 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
MRE11P49959 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
MRE11P49959 AC126323.6-202ENST00000568092 3511 ntBASIC6.23□□□□□ -1.41
MRE11P49959 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
MRE11P49959 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
MRE11P49959 SNORA64.1-201ENST00000362600 132 ntBASIC6.23□□□□□ -1.41
MRE11P49959 AL589647.1-201ENST00000402485 466 ntBASIC6.23□□□□□ -1.41
MRE11P49959 SFR1P1-201ENST00000403720 688 ntBASIC6.23□□□□□ -1.41
MRE11P49959 RN7SKP16-201ENST00000410180 299 ntBASIC6.23□□□□□ -1.41
MRE11P49959 MTND4P22-201ENST00000413116 1169 ntBASIC6.23□□□□□ -1.41
MRE11P49959 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.23□□□□□ -1.41
MRE11P49959 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC6.23□□□□□ -1.41
MRE11P49959 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.23□□□□□ -1.41
MRE11P49959 AL589823.1-201ENST00000429577 183 ntBASIC6.23□□□□□ -1.41
MRE11P49959 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.23□□□□□ -1.41
MRE11P49959 AC046176.1-201ENST00000435260 1170 ntBASIC6.23□□□□□ -1.41
MRE11P49959 AL138787.1-202ENST00000437804 898 ntBASIC6.23□□□□□ -1.41
MRE11P49959 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.23□□□□□ -1.41
MRE11P49959 CEACAMP7-201ENST00000444105 496 ntBASIC6.23□□□□□ -1.41
MRE11P49959 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.23□□□□□ -1.41
MRE11P49959 AL589880.1-201ENST00000448271 287 ntBASIC6.23□□□□□ -1.41
MRE11P49959 MTCO3P16-201ENST00000454456 754 ntBASIC6.23□□□□□ -1.41
MRE11P49959 RPL7P45-201ENST00000455851 743 ntBASIC6.23□□□□□ -1.41
MRE11P49959 RN7SL172P-201ENST00000460535 303 ntBASIC6.23□□□□□ -1.41
MRE11P49959 RN7SL269P-201ENST00000467795 305 ntBASIC6.23□□□□□ -1.41
MRE11P49959 AC011037.1-201ENST00000483964 558 ntBASIC6.23□□□□□ -1.41
MRE11P49959 RPS24P16-201ENST00000497294 392 ntBASIC6.23□□□□□ -1.41
MRE11P49959 AC138866.2-201ENST00000508650 584 ntBASIC6.23□□□□□ -1.41
MRE11P49959 MRPS33P3-201ENST00000513456 322 ntBASIC6.23□□□□□ -1.41
MRE11P49959 AC139365.2-201ENST00000517972 253 ntBASIC6.23□□□□□ -1.41
MRE11P49959 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC6.23□□□□□ -1.41
MRE11P49959 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
MRE11P49959 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.23□□□□□ -1.41
MRE11P49959 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
MRE11P49959 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.23□□□□□ -1.41
MRE11P49959 AC011840.5-201ENST00000582125 771 ntBASIC6.23□□□□□ -1.41
MRE11P49959 CBX3P2-202ENST00000583365 535 ntBASIC6.23□□□□□ -1.41
MRE11P49959 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.23□□□□□ -1.41
MRE11P49959 AC018638.7-201ENST00000605836 1114 ntBASIC6.23□□□□□ -1.41
MRE11P49959 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
MRE11P49959 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
MRE11P49959 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
MRE11P49959 CASC19-264ENST00000641912 1184 ntBASIC6.23□□□□□ -1.41
MRE11P49959 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
MRE11P49959 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
MRE11P49959 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms