Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MTND4LP2-201ENST00000502312 285 ntBASIC4.07□□□□□ -1.76
CSNK1A1P48729 AC007016.1-201ENST00000512110 244 ntBASIC4.07□□□□□ -1.76
CSNK1A1P48729 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CSNK1A1P48729 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.07□□□□□ -1.76
CSNK1A1P48729 TRAV11-201ENST00000539512 339 ntBASIC4.07□□□□□ -1.76
CSNK1A1P48729 AC125612.1-201ENST00000547580 377 ntBASIC4.07□□□□□ -1.76
CSNK1A1P48729 AC068714.1-201ENST00000559623 800 ntBASIC4.07□□□□□ -1.76
CSNK1A1P48729 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.07□□□□□ -1.76
CSNK1A1P48729 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.07□□□□□ -1.76
CSNK1A1P48729 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.07□□□□□ -1.76
CSNK1A1P48729 AC009303.3-201ENST00000591103 736 ntBASIC4.07□□□□□ -1.76
CSNK1A1P48729 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.07□□□□□ -1.76
CSNK1A1P48729 AC073091.2-201ENST00000603205 907 ntBASIC4.07□□□□□ -1.76
CSNK1A1P48729 AC084373.1-201ENST00000603311 235 ntBASIC4.07□□□□□ -1.76
CSNK1A1P48729 AC024940.4-201ENST00000605507 246 ntBASIC4.07□□□□□ -1.76
CSNK1A1P48729 uc_338.18-201ENST00000615451 175 ntBASIC4.07□□□□□ -1.76
CSNK1A1P48729 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.07□□□□□ -1.76
CSNK1A1P48729 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.07□□□□□ -1.76
CSNK1A1P48729 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.07□□□□□ -1.76
CSNK1A1P48729 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSNK1A1P48729 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CSNK1A1P48729 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSNK1A1P48729 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CSNK1A1P48729 AC074029.4-201ENST00000624796 1859 ntBASIC4.07□□□□□ -1.76
CSNK1A1P48729 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.07□□□□□ -1.76
CSNK1A1P48729 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CSNK1A1P48729 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 MFSD8-242ENST00000641690 4199 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CSNK1A1P48729 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CSNK1A1P48729 RNU1-94P-201ENST00000362627 173 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 RNU6-1251P-201ENST00000364502 107 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 SNORD65-201ENST00000391079 73 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 OR1F12-201ENST00000402365 945 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 AL034374.1-201ENST00000406329 351 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 FCF1P5-201ENST00000406490 482 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 RPL21P108-201ENST00000413857 481 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 CEACAMP8-201ENST00000413902 580 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 CYCSP10-201ENST00000417973 294 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 AC004690.1-201ENST00000418216 328 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 USP9YP9-201ENST00000429406 715 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 MTCO3P21-201ENST00000430791 643 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 LYPLA1P1-201ENST00000434514 622 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 PPIAP13-201ENST00000434706 478 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 AL162388.1-201ENST00000450912 352 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 FCF1P7-201ENST00000451185 558 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 RPL31P53-201ENST00000457065 348 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 OR5M2P-201ENST00000529003 936 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 RPL21P7-201ENST00000557463 483 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 RN7SL176P-201ENST00000580352 264 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 AC209154.1-201ENST00000582156 337 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 ADAD1P2-201ENST00000588476 646 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 FAM60CP-201ENST00000591086 664 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 AC010200.2-201ENST00000605098 235 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 Mico1.1-201ENST00000611698 204 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 AC100827.5-201ENST00000615883 426 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CSNK1A1P48729 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CSNK1A1P48729 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 AC007390.2-201ENST00000606229 3803 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 HSPD1P14-201ENST00000432666 1618 ntBASIC4.06□□□□□ -1.76
CSNK1A1P48729 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CSNK1A1P48729 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSNK1A1P48729 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CSNK1A1P48729 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
CSNK1A1P48729 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CSNK1A1P48729 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.05□□□□□ -1.76
CSNK1A1P48729 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CSNK1A1P48729 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CSNK1A1P48729 SDHCP2-201ENST00000398565 501 ntBASIC4.05□□□□□ -1.76
CSNK1A1P48729 HSPD1P16-201ENST00000402302 394 ntBASIC4.05□□□□□ -1.76
CSNK1A1P48729 RNA5SP146-201ENST00000410743 123 ntBASIC4.05□□□□□ -1.76
CSNK1A1P48729 VDAC1P9-201ENST00000412766 841 ntBASIC4.05□□□□□ -1.76
CSNK1A1P48729 CASKP1-201ENST00000412870 582 ntBASIC4.05□□□□□ -1.76
CSNK1A1P48729 RPS12P10-201ENST00000427031 377 ntBASIC4.05□□□□□ -1.76
CSNK1A1P48729 RPL23AP25-201ENST00000430973 463 ntBASIC4.05□□□□□ -1.76
CSNK1A1P48729 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.05□□□□□ -1.76
CSNK1A1P48729 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.05□□□□□ -1.76
CSNK1A1P48729 AL049745.1-201ENST00000433953 286 ntBASIC4.05□□□□□ -1.76
CSNK1A1P48729 CACYBPP1-201ENST00000438592 684 ntBASIC4.05□□□□□ -1.76
CSNK1A1P48729 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.05□□□□□ -1.76
CSNK1A1P48729 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms