Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 MIR491-201ENST00000384877 84 ntBASIC5.19□□□□□ -1.58
SCN4AP35499 NDUFB4P4-201ENST00000404822 243 ntBASIC5.19□□□□□ -1.58
SCN4AP35499 AC114814.2-201ENST00000419195 485 ntBASIC5.19□□□□□ -1.58
SCN4AP35499 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.19□□□□□ -1.58
SCN4AP35499 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
SCN4AP35499 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.19□□□□□ -1.58
SCN4AP35499 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.19□□□□□ -1.58
SCN4AP35499 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.19□□□□□ -1.58
SCN4AP35499 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.19□□□□□ -1.58
SCN4AP35499 AC010608.2-201ENST00000624830 470 ntBASIC5.19□□□□□ -1.58
SCN4AP35499 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.19□□□□□ -1.58
SCN4AP35499 AC005261.2-201ENST00000593427 4258 ntBASIC5.19□□□□□ -1.58
SCN4AP35499 DDX18P5-201ENST00000534547 1306 ntBASIC5.19□□□□□ -1.58
SCN4AP35499 AL929601.4-201ENST00000613011 1341 ntBASIC5.19□□□□□ -1.58
SCN4AP35499 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SCN4AP35499 EIF3EP2-201ENST00000423042 1814 ntBASIC5.19□□□□□ -1.58
SCN4AP35499 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.19□□□□□ -1.58
SCN4AP35499 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCN4AP35499 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.19□□□□□ -1.58
SCN4AP35499 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCN4AP35499 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.18□□□□□ -1.58
SCN4AP35499 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SCN4AP35499 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SCN4AP35499 RN7SKP182-201ENST00000410772 298 ntBASIC5.18□□□□□ -1.58
SCN4AP35499 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.18□□□□□ -1.58
SCN4AP35499 CYCSP10-201ENST00000417973 294 ntBASIC5.18□□□□□ -1.58
SCN4AP35499 AC115285.1-201ENST00000424879 736 ntBASIC5.18□□□□□ -1.58
SCN4AP35499 CKS1BP6-201ENST00000424932 240 ntBASIC5.18□□□□□ -1.58
SCN4AP35499 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN4AP35499 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN4AP35499 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN4AP35499 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.18□□□□□ -1.58
SCN4AP35499 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.18□□□□□ -1.58
SCN4AP35499 AC103968.1-201ENST00000557841 573 ntBASIC5.18□□□□□ -1.58
SCN4AP35499 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.18□□□□□ -1.58
SCN4AP35499 AL445363.3-201ENST00000623080 671 ntBASIC5.18□□□□□ -1.58
SCN4AP35499 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN4AP35499 AL731532.2-201ENST00000623542 1953 ntBASIC5.18□□□□□ -1.58
SCN4AP35499 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.18□□□□□ -1.58
SCN4AP35499 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN4AP35499 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCN4AP35499 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.18□□□□□ -1.58
SCN4AP35499 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.18□□□□□ -1.58
SCN4AP35499 AL590704.1-201ENST00000402856 794 ntBASIC5.18□□□□□ -1.58
SCN4AP35499 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN4AP35499 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.18□□□□□ -1.58
SCN4AP35499 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCN4AP35499 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN4AP35499 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN4AP35499 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCN4AP35499 GTF2IP22-201ENST00000554443 182 ntBASIC5.18□□□□□ -1.58
SCN4AP35499 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN4AP35499 AC011471.1-201ENST00000585766 187 ntBASIC5.18□□□□□ -1.58
SCN4AP35499 ADAD1P2-201ENST00000588476 646 ntBASIC5.18□□□□□ -1.58
SCN4AP35499 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.18□□□□□ -1.58
SCN4AP35499 BNIP3P41-202ENST00000616656 861 ntBASIC5.18□□□□□ -1.58
SCN4AP35499 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.18□□□□□ -1.58
SCN4AP35499 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN4AP35499 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SCN4AP35499 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.18□□□□□ -1.58
SCN4AP35499 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN4AP35499 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN4AP35499 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SCN4AP35499 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN4AP35499 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SCN4AP35499 SNORA73.2-201ENST00000364946 201 ntBASIC5.17□□□□□ -1.58
SCN4AP35499 TPT1P2-201ENST00000413105 503 ntBASIC5.17□□□□□ -1.58
SCN4AP35499 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN4AP35499 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN4AP35499 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN4AP35499 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN4AP35499 AF131215.7-201ENST00000602443 707 ntBASIC5.17□□□□□ -1.58
SCN4AP35499 AC023762.1-201ENST00000603280 584 ntBASIC5.17□□□□□ -1.58
SCN4AP35499 AC009093.8-201ENST00000641769 292 ntBASIC5.17□□□□□ -1.58
SCN4AP35499 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SCN4AP35499 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN4AP35499 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN4AP35499 AL031595.2-201ENST00000624215 19071 ntBASIC5.17□□□□□ -1.58
SCN4AP35499 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN4AP35499 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
SCN4AP35499 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
SCN4AP35499 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN4AP35499 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN4AP35499 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
SCN4AP35499 OR11H4-201ENST00000315409 1082 ntBASIC5.16□□□□□ -1.58
SCN4AP35499 AC008549.2-201ENST00000333482 706 ntBASIC5.16□□□□□ -1.58
SCN4AP35499 EIF4HP2-201ENST00000424380 563 ntBASIC5.16□□□□□ -1.58
SCN4AP35499 AC091286.1-201ENST00000431233 461 ntBASIC5.16□□□□□ -1.58
SCN4AP35499 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN4AP35499 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN4AP35499 ATP5G1P3-201ENST00000463301 410 ntBASIC5.16□□□□□ -1.58
SCN4AP35499 ASNSP4-201ENST00000511103 447 ntBASIC5.16□□□□□ -1.58
SCN4AP35499 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.16□□□□□ -1.58
SCN4AP35499 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN4AP35499 PCA3_2.1-201ENST00000612507 409 ntBASIC5.16□□□□□ -1.58
SCN4AP35499 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.16□□□□□ -1.58
SCN4AP35499 MIR6500-201ENST00000622700 86 ntBASIC5.16□□□□□ -1.58
SCN4AP35499 FP325313.1-201ENST00000638228 703 ntBASIC5.16□□□□□ -1.58
SCN4AP35499 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SCN4AP35499 AL138820.1-201ENST00000617901 5305 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms