Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 TTLL9-206ENST00000535842 3261 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
HOXD11P31277 CCL14-201ENST00000614009 3265 ntTSL 2 BASIC9.22□□□□□ -0.93
HOXD11P31277 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
HOXD11P31277 SLC9B2-204ENST00000503230 1826 ntTSL 2 BASIC9.21□□□□□ -0.93
HOXD11P31277 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
HOXD11P31277 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
HOXD11P31277 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
HOXD11P31277 NRXN3-215ENST00000557594 3381 ntTSL 2 BASIC9.21□□□□□ -0.93
HOXD11P31277 HADHAP2-201ENST00000540341 2285 ntBASIC9.21□□□□□ -0.93
HOXD11P31277 MPHOSPH8-201ENST00000361479 4235 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
HOXD11P31277 ILF3-222ENST00000592763 3866 ntTSL 5 BASIC9.21□□□□□ -0.93
HOXD11P31277 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
HOXD11P31277 TAF8-201ENST00000372977 6680 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
HOXD11P31277 ADHFE1-204ENST00000415254 1956 ntTSL 5 BASIC9.21□□□□□ -0.93
HOXD11P31277 MERTK-202ENST00000409780 3189 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
HOXD11P31277 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
HOXD11P31277 FANCB-201ENST00000324138 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
HOXD11P31277 ZNF750-201ENST00000269394 3713 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
HOXD11P31277 CUL4A-201ENST00000326335 3705 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
HOXD11P31277 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
HOXD11P31277 TAF1L-201ENST00000242310 6216 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
HOXD11P31277 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
HOXD11P31277 RNU6-1293P-201ENST00000384077 107 ntBASIC9.21□□□□□ -0.94
HOXD11P31277 Y_RNA.521-201ENST00000384560 114 ntBASIC9.21□□□□□ -0.94
HOXD11P31277 MIR153-2-201ENST00000385225 87 ntBASIC9.21□□□□□ -0.94
HOXD11P31277 Y_RNA.630-201ENST00000411370 108 ntBASIC9.21□□□□□ -0.94
HOXD11P31277 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC9.21□□□□□ -0.94
HOXD11P31277 RPS10P2-201ENST00000430953 494 ntBASIC9.21□□□□□ -0.94
HOXD11P31277 SNX18P26-201ENST00000458433 740 ntBASIC9.21□□□□□ -0.94
HOXD11P31277 AC104619.1-201ENST00000459634 631 ntBASIC9.21□□□□□ -0.94
HOXD11P31277 AC018523.1-201ENST00000534211 512 ntBASIC9.21□□□□□ -0.94
HOXD11P31277 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC9.21□□□□□ -0.94
HOXD11P31277 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC9.21□□□□□ -0.94
HOXD11P31277 RN7SL45P-201ENST00000578050 298 ntBASIC9.21□□□□□ -0.94
HOXD11P31277 MIR5003-201ENST00000581891 99 ntBASIC9.21□□□□□ -0.94
HOXD11P31277 RN7SL474P-201ENST00000583485 301 ntBASIC9.21□□□□□ -0.94
HOXD11P31277 CUTA-214ENST00000607266 661 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
HOXD11P31277 TEX41-243ENST00000614173 190 ntTSL 5 BASIC9.21□□□□□ -0.94
HOXD11P31277 AC124319.3-201ENST00000616832 526 ntBASIC9.21□□□□□ -0.94
HOXD11P31277 AC040978.1-201ENST00000617244 1282 ntBASIC9.21□□□□□ -0.94
HOXD11P31277 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
HOXD11P31277 FOLR2-210ENST00000619261 1126 ntTSL 5 BASIC9.21□□□□□ -0.94
HOXD11P31277 RNU6-156P-201ENST00000621869 107 ntBASIC9.21□□□□□ -0.94
HOXD11P31277 SPTAN1-201ENST00000358161 7794 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
HOXD11P31277 FAM234B-201ENST00000197268 4808 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
HOXD11P31277 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
HOXD11P31277 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
HOXD11P31277 CCDC88A-202ENST00000336838 9505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
HOXD11P31277 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
HOXD11P31277 KDM4C-201ENST00000381306 4601 ntTSL 2 BASIC9.21□□□□□ -0.94
HOXD11P31277 NCEH1-204ENST00000475381 4687 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
HOXD11P31277 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC9.21□□□□□ -0.94
HOXD11P31277 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
HOXD11P31277 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC9.21□□□□□ -0.94
HOXD11P31277 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
HOXD11P31277 AC138207.6-201ENST00000579164 1967 ntBASIC9.21□□□□□ -0.94
HOXD11P31277 NDST2-201ENST00000299641 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
HOXD11P31277 LINC00930-202ENST00000557075 1541 ntTSL 2 BASIC9.21□□□□□ -0.94
HOXD11P31277 BTN2A3P-204ENST00000466808 2559 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HOXD11P31277 LINC00635-202ENST00000464359 2119 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HOXD11P31277 ZNF548-202ENST00000366197 4955 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
HOXD11P31277 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
HOXD11P31277 AP002748.4-201ENST00000419755 3547 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
HOXD11P31277 GALNTL5-211ENST00000616416 1763 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
HOXD11P31277 CTAGE12P-201ENST00000400348 2364 ntBASIC9.2□□□□□ -0.94
HOXD11P31277 MLH1-222ENST00000539477 2366 ntTSL 2 BASIC9.2□□□□□ -0.94
HOXD11P31277 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
HOXD11P31277 FBXO48-201ENST00000377957 5666 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
HOXD11P31277 DUSP6-201ENST00000279488 4400 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
HOXD11P31277 RNU1-21P-201ENST00000363327 163 ntBASIC9.2□□□□□ -0.94
HOXD11P31277 Y_RNA.251-201ENST00000364551 99 ntBASIC9.2□□□□□ -0.94
HOXD11P31277 BTF3L4P2-201ENST00000392798 346 ntBASIC9.2□□□□□ -0.94
HOXD11P31277 SNRPEP6-201ENST00000407465 277 ntBASIC9.2□□□□□ -0.94
HOXD11P31277 RHBDD1-203ENST00000409053 538 ntTSL 4 BASIC9.2□□□□□ -0.94
HOXD11P31277 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC9.2□□□□□ -0.94
HOXD11P31277 AL133482.1-201ENST00000415988 498 ntBASIC9.2□□□□□ -0.94
HOXD11P31277 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC9.2□□□□□ -0.94
HOXD11P31277 Y_RNA.637-201ENST00000459424 114 ntBASIC9.2□□□□□ -0.94
HOXD11P31277 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HOXD11P31277 MRPS33P2-201ENST00000507850 322 ntBASIC9.2□□□□□ -0.94
HOXD11P31277 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC9.2□□□□□ -0.94
HOXD11P31277 AC130366.1-201ENST00000526505 1192 ntBASIC9.2□□□□□ -0.94
HOXD11P31277 SRMP2-201ENST00000553832 916 ntBASIC9.2□□□□□ -0.94
HOXD11P31277 AP002439.1-201ENST00000588204 480 ntTSL 4 BASIC9.2□□□□□ -0.94
HOXD11P31277 AP001554.1-201ENST00000604533 376 ntBASIC9.2□□□□□ -0.94
HOXD11P31277 NLRP1-216ENST00000617618 4788 ntAPPRIS P4 TSL 5 BASIC9.2□□□□□ -0.94
HOXD11P31277 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC9.2□□□□□ -0.94
HOXD11P31277 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC9.2□□□□□ -0.94
HOXD11P31277 ADGRF2-201ENST00000296862 2127 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HOXD11P31277 TSHZ1-201ENST00000322038 4992 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HOXD11P31277 CUL2-202ENST00000374748 4312 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
HOXD11P31277 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
HOXD11P31277 RIPOR2-201ENST00000259698 5471 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
HOXD11P31277 SCN10A-201ENST00000449082 6418 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
HOXD11P31277 AP002490.1-201ENST00000502284 4233 ntTSL 2 BASIC9.2□□□□□ -0.94
HOXD11P31277 PIGN-202ENST00000400334 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HOXD11P31277 PPP4R1L-202ENST00000334187 2746 ntBASIC9.19□□□□□ -0.94
HOXD11P31277 CHD3-201ENST00000330494 7328 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
HOXD11P31277 KLHL32-204ENST00000536676 3699 ntTSL 2 BASIC9.19□□□□□ -0.94
HOXD11P31277 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 283.3 ms