Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLIP1P30622 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLIP1P30622 RPL21P65-201ENST00000406094 466 ntBASIC6.76□□□□□ -1.33
CLIP1P30622 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.76□□□□□ -1.33
CLIP1P30622 RNA5SP103-201ENST00000459503 118 ntBASIC6.76□□□□□ -1.33
CLIP1P30622 RN7SL817P-201ENST00000480777 288 ntBASIC6.76□□□□□ -1.33
CLIP1P30622 TPT1P3-201ENST00000492841 512 ntBASIC6.76□□□□□ -1.33
CLIP1P30622 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.76□□□□□ -1.33
CLIP1P30622 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.76□□□□□ -1.33
CLIP1P30622 AC108064.1-201ENST00000513791 460 ntBASIC6.76□□□□□ -1.33
CLIP1P30622 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.76□□□□□ -1.33
CLIP1P30622 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CLIP1P30622 MIR4286-201ENST00000580651 93 ntBASIC6.76□□□□□ -1.33
CLIP1P30622 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CLIP1P30622 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CLIP1P30622 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.75□□□□□ -1.33
CLIP1P30622 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC6.75□□□□□ -1.33
CLIP1P30622 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC6.75□□□□□ -1.33
CLIP1P30622 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC6.75□□□□□ -1.33
CLIP1P30622 RN7SKP182-201ENST00000410772 298 ntBASIC6.75□□□□□ -1.33
CLIP1P30622 CEACAMP8-201ENST00000413902 580 ntBASIC6.75□□□□□ -1.33
CLIP1P30622 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.75□□□□□ -1.33
CLIP1P30622 AL117339.2-201ENST00000430475 180 ntBASIC6.75□□□□□ -1.33
CLIP1P30622 AF213884.1-201ENST00000488102 463 ntBASIC6.75□□□□□ -1.33
CLIP1P30622 KCTD9P2-201ENST00000512203 1013 ntBASIC6.75□□□□□ -1.33
CLIP1P30622 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.75□□□□□ -1.33
CLIP1P30622 GLRXP2-201ENST00000555594 321 ntBASIC6.75□□□□□ -1.33
CLIP1P30622 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.75□□□□□ -1.33
CLIP1P30622 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CLIP1P30622 AC008079.2-201ENST00000623543 20396 ntBASIC6.74□□□□□ -1.33
CLIP1P30622 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CLIP1P30622 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CLIP1P30622 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
CLIP1P30622 MIR195-201ENST00000385194 87 ntBASIC6.74□□□□□ -1.33
CLIP1P30622 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.74□□□□□ -1.33
CLIP1P30622 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC6.74□□□□□ -1.33
CLIP1P30622 EIF1P3-201ENST00000423841 334 ntBASIC6.74□□□□□ -1.33
CLIP1P30622 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.74□□□□□ -1.33
CLIP1P30622 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.74□□□□□ -1.33
CLIP1P30622 MRPL50P1-201ENST00000431951 384 ntBASIC6.74□□□□□ -1.33
CLIP1P30622 RRM2P4-201ENST00000441721 562 ntBASIC6.74□□□□□ -1.33
CLIP1P30622 SETP4-201ENST00000455717 868 ntBASIC6.74□□□□□ -1.33
CLIP1P30622 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC6.74□□□□□ -1.33
CLIP1P30622 VN1R105P-201ENST00000486595 910 ntBASIC6.74□□□□□ -1.33
CLIP1P30622 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.74□□□□□ -1.33
CLIP1P30622 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.74□□□□□ -1.33
CLIP1P30622 MTCO1P49-201ENST00000523429 802 ntBASIC6.74□□□□□ -1.33
CLIP1P30622 RPL21P7-201ENST00000557463 483 ntBASIC6.74□□□□□ -1.33
CLIP1P30622 AC022655.2-201ENST00000577280 318 ntBASIC6.74□□□□□ -1.33
CLIP1P30622 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.74□□□□□ -1.33
CLIP1P30622 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.74□□□□□ -1.33
CLIP1P30622 RNU4-89P-201ENST00000607443 133 ntBASIC6.74□□□□□ -1.33
CLIP1P30622 AC019278.1-201ENST00000623516 479 ntBASIC6.74□□□□□ -1.33
CLIP1P30622 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CLIP1P30622 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CLIP1P30622 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CLIP1P30622 CYP1D1P-201ENST00000416662 1433 ntBASIC6.73□□□□□ -1.33
CLIP1P30622 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CLIP1P30622 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CLIP1P30622 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC6.73□□□□□ -1.33
CLIP1P30622 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CLIP1P30622 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CLIP1P30622 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CLIP1P30622 RNA5SP130-201ENST00000364431 114 ntBASIC6.73□□□□□ -1.33
CLIP1P30622 RNU11-4P-201ENST00000391149 133 ntBASIC6.73□□□□□ -1.33
CLIP1P30622 MIR1179-201ENST00000408703 91 ntBASIC6.73□□□□□ -1.33
CLIP1P30622 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CLIP1P30622 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC6.73□□□□□ -1.33
CLIP1P30622 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.73□□□□□ -1.33
CLIP1P30622 RN7SL542P-201ENST00000467147 294 ntBASIC6.73□□□□□ -1.33
CLIP1P30622 AC034236.1-201ENST00000469891 373 ntBASIC6.73□□□□□ -1.33
CLIP1P30622 BNIP3P41-201ENST00000503774 571 ntBASIC6.73□□□□□ -1.33
CLIP1P30622 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC6.73□□□□□ -1.33
CLIP1P30622 AC107993.1-201ENST00000591343 684 ntBASIC6.73□□□□□ -1.33
CLIP1P30622 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.73□□□□□ -1.33
CLIP1P30622 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.73□□□□□ -1.33
CLIP1P30622 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CLIP1P30622 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.73□□□□□ -1.33
CLIP1P30622 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CLIP1P30622 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CLIP1P30622 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC6.72□□□□□ -1.33
CLIP1P30622 AL161912.2-201ENST00000565707 3007 ntBASIC6.72□□□□□ -1.33
CLIP1P30622 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CLIP1P30622 SMG1P4-204ENST00000523028 4131 ntBASIC6.72□□□□□ -1.33
CLIP1P30622 AC126323.6-202ENST00000568092 3511 ntBASIC6.72□□□□□ -1.33
CLIP1P30622 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CLIP1P30622 CYCSP19-201ENST00000411715 316 ntBASIC6.72□□□□□ -1.33
CLIP1P30622 RN7SL604P-201ENST00000492589 296 ntBASIC6.72□□□□□ -1.33
CLIP1P30622 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC6.72□□□□□ -1.33
CLIP1P30622 OR7E10P-201ENST00000526420 991 ntBASIC6.72□□□□□ -1.33
CLIP1P30622 AC008759.1-201ENST00000589783 983 ntBASIC6.72□□□□□ -1.33
CLIP1P30622 AC006133.1-201ENST00000617106 264 ntBASIC6.72□□□□□ -1.33
CLIP1P30622 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CLIP1P30622 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CLIP1P30622 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.71□□□□□ -1.33
CLIP1P30622 AC007998.4-201ENST00000612496 2533 ntBASIC6.71□□□□□ -1.33
CLIP1P30622 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
CLIP1P30622 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CLIP1P30622 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CLIP1P30622 TPT1P2-201ENST00000413105 503 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms